Literature DB >> 18757571

Identification of critical members in a sulfidogenic benzene-degrading consortium by DNA stable isotope probing.

A R Oka1, C D Phelps, L M McGuinness, A Mumford, L Y Young, L J Kerkhof.   

Abstract

Stable isotope probing (SIP) was used to identify the active members in a benzene-degrading sulfidogenic consortium. SIP-terminal restriction fragment length polymorphism analysis indicated that a 270-bp peak incorporated the majority of the (13)C label and is a sequence closely related to that of clone SB-21 (GenBank accession no. AF029045). This target may be an important biomarker for anaerobic benzene degradation in the field.

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Year:  2008        PMID： 18757571      PMCID： PMC2570285          DOI： 10.1128/AEM.01082-08

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  26 in total

1.  Towards elucidation of microbial community metabolic pathways: unravelling the network of carbon sharing in a pollutant-degrading bacterial consortium by immunocapture and isotopic ratio mass spectrometry.

Authors:  O Pelz; M Tesar; R M Wittich; E R Moore; K N Timmis; W R Abraham
Journal:  Environ Microbiol       Date:  1999-04       Impact factor: 5.491

2.  13C-carrier DNA shortens the incubation time needed to detect benzoate-utilizing denitrifying bacteria by stable-isotope probing.

Authors:  E Gallagher; L McGuinness; C Phelps; L Y Young; L J Kerkhof
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

3.  Replicability of bacterial communities in denitrifying bioreactors as measured by PCR/T-RFLP analysis.

Authors:  Lora M McGuinness; Max Salganik; Leticia Vega; Karen D Pickering; Lee J Kerkhof
Journal:  Environ Sci Technol       Date:  2006-01-15       Impact factor: 9.028

4.  Anaerobic degradation of benzene by a marine sulfate-reducing enrichment culture, and cell hybridization of the dominant phylotype.

Authors:  Florin Musat; Friedrich Widdel
Journal:  Environ Microbiol       Date:  2008-01       Impact factor: 5.491

5.  Anaerobic degradation of benzoate to methane by a microbial consortium.

Authors:  J G Ferry; R S Wolfe
Journal:  Arch Microbiol       Date:  1976-02       Impact factor: 2.552

6.  RNA-based stable isotope probing and isolation of anaerobic benzene-degrading bacteria from gasoline-contaminated groundwater.

Authors:  Yuki Kasai; Yoh Takahata; Mike Manefield; Kazuya Watanabe
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

7.  Stable-isotope probing of bacteria capable of degrading salicylate, naphthalene, or phenanthrene in a bioreactor treating contaminated soil.

Authors:  David R Singleton; Sabrina N Powell; Ramiah Sangaiah; Avram Gold; Louise M Ball; Michael D Aitken
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

8.  Metabolism of both 4-chlorobenzoate and toluene under denitrifying conditions by a constructed bacterial strain.

Authors:  P W Coschigano; M M Häggblom; L Y Young
Journal:  Appl Environ Microbiol       Date:  1994-03       Impact factor: 4.792

9.  Anaerobic benzene biodegradation--a new era.

Authors:  John D Coates; Romy Chakraborty; Michael J McInerney
Journal:  Res Microbiol       Date:  2002-12       Impact factor: 3.992

10.  Growth in coculture stimulates metabolism of the phenylurea herbicide isoproturon by Sphingomonas sp. strain SRS2.

Authors:  Sebastian R Sørensen; Zeev Ronen; Jens Aamand
Journal:  Appl Environ Microbiol       Date:  2002-07       Impact factor: 4.792
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  8 in total

1.  Anaerobic methyl tert-butyl ether-degrading microorganisms identified in wastewater treatment plant samples by stable isotope probing.

Authors:  Weimin Sun; Xiaoxu Sun; Alison M Cupples
Journal:  Appl Environ Microbiol       Date:  2012-02-10       Impact factor: 4.792

2.  Anaerobic oxidation of benzene by the hyperthermophilic archaeon Ferroglobus placidus.

Authors:  Dawn E Holmes; Carla Risso; Jessica A Smith; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2011-07-08       Impact factor: 4.792

Review 3.  Anaerobic benzene degradation by bacteria.

Authors:  Carsten Vogt; Sabine Kleinsteuber; Hans-Hermann Richnow
Journal:  Microb Biotechnol       Date:  2011-03-30       Impact factor: 5.813

4.  Biosphere frontiers of subsurface life in the sedimented hydrothermal system of Guaymas Basin.

Authors:  Andreas Teske; Amy V Callaghan; Douglas E LaRowe
Journal:  Front Microbiol       Date:  2014-07-31       Impact factor: 5.640

5.  Time-resolved DNA stable isotope probing links Desulfobacterales- and Coriobacteriaceae-related bacteria to anaerobic degradation of benzene under methanogenic conditions.

Authors:  Mana Noguchi; Futoshi Kurisu; Ikuro Kasuga; Hiroaki Furumai
Journal:  Microbes Environ       Date:  2014-06-06       Impact factor: 2.912

6.  New Bio-Indicators for Long Term Natural Attenuation of Monoaromatic Compounds in Deep Terrestrial Aquifers.

Authors:  Thomas Aüllo; Sabrina Berlendis; Jean-François Lascourrèges; Daniel Dessort; Dominique Duclerc; Stéphanie Saint-Laurent; Blandine Schraauwers; Johan Mas; Delphine Patriarche; Cécile Boesinger; Michel Magot; Anthony Ranchou-Peyruse
Journal:  Front Microbiol       Date:  2016-02-09       Impact factor: 5.640

7.  Anaerobic benzene mineralization by natural microbial communities from Niger Delta.

Authors:  Samuel C Eziuzor; Matthias Schmidt; Carsten Vogt
Journal:  Biodegradation       Date:  2020-12-02       Impact factor: 3.909

8.  A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways.

Authors:  Siavash Atashgahi; Bastian Hornung; Marcelle J van der Waals; Ulisses Nunes da Rocha; Floor Hugenholtz; Bart Nijsse; Douwe Molenaar; Rob van Spanning; Alfons J M Stams; Jan Gerritse; Hauke Smidt
Journal:  Sci Rep       Date:  2018-03-14       Impact factor: 4.379
  8 in total

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