Literature DB >> 18729217

The Caenorhabditis elegans DDX-23, a homolog of yeast splicing factor PRP28, is required for the sperm-oocyte switch and differentiation of various cell types.

Takafumi Konishi1, Nobuko Uodome, Asako Sugimoto.   

Abstract

DEAD/H-box proteins are involved in various aspects of RNA metabolism. Here we report the developmental function of a DEAD-box protein, DDX-23, in Caenorhabditis elegans, which has significant homology with the yeast splicing factor PRP28. We found by RNAi and mutant analyses that DDX-23 is essential for both embryonic and post-embryonic development, and required for differentiation of the majority of somatic tissues. When the germline function of ddx-23 was inhibited, hermaphrodite animals showed a reduced number of germ cells and failed to switch from spermatogenesis to oogenesis. These phenotypes were similar to those of the mutants of the three DEAH-box proteins (MOG-1, MOG-4, and MOG-5) whose yeast orthologs are involved in the pre-mRNA splicing pathway. We speculate that DDX-23 functions with the three MOG proteins in the same pathway to regulate tissue differentiation, robust germline proliferation, and the sperm/oocyte switch through modulations of ribonucleoprotein complexes.

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Year:  2008        PMID: 18729217     DOI: 10.1002/dvdy.21649

Source DB:  PubMed          Journal:  Dev Dyn        ISSN: 1058-8388            Impact factor:   3.780


  11 in total

1.  TEG-1 CD2BP2 regulates stem cell proliferation and sex determination in the C. elegans germ line and physically interacts with the UAF-1 U2AF65 splicing factor.

Authors:  Chris Wang; Laura Wilson-Berry; Tim Schedl; Dave Hansen
Journal:  Dev Dyn       Date:  2012-01-30       Impact factor: 3.780

2.  Functional recovery of the germ line following splicing collapse.

Authors:  Wei Cao; Christopher Tran; Stuart K Archer; Sandeep Gopal; Roger Pocock
Journal:  Cell Death Differ       Date:  2021-10-18       Impact factor: 12.067

3.  The canonical eIF4E isoform of C. elegans regulates growth, embryogenesis, and germline sex-determination.

Authors:  Richard S Mangio; SarahBeth Votra; David Pruyne
Journal:  Biol Open       Date:  2015-05-15       Impact factor: 2.422

4.  SMA1, a homolog of the splicing factor Prp28, has a multifaceted role in miRNA biogenesis in Arabidopsis.

Authors:  Shengjun Li; Ran Xu; Aixia Li; Kan Liu; Liqing Gu; Mu Li; Hairui Zhang; Yueying Zhang; Shangshang Zhuang; Quanhui Wang; Gang Gao; Na Li; Chi Zhang; Yunhai Li; Bin Yu
Journal:  Nucleic Acids Res       Date:  2018-09-28       Impact factor: 16.971

5.  A Genome-Wide RNAi Screen for Enhancers of a Germline Tumor Phenotype Caused by Elevated GLP-1/Notch Signaling in Caenorhabditis elegans.

Authors:  Diana Dalfó; Yanhui Ding; Qifei Liang; Alex Fong; Patricia Giselle Cipriani; Fabio Piano; Jialin C Zheng; Zhao Qin; E Jane Albert Hubbard
Journal:  G3 (Bethesda)       Date:  2020-12-03       Impact factor: 3.154

6.  The DEAD-box protein MEL-46 is required in the germ line of the nematode Caenorhabditis elegans.

Authors:  Ryuji Minasaki; Alessandro Puoti; Adrian Streit
Journal:  BMC Dev Biol       Date:  2009-06-17       Impact factor: 1.978

7.  RSR-2, the Caenorhabditis elegans ortholog of human spliceosomal component SRm300/SRRM2, regulates development by influencing the transcriptional machinery.

Authors:  Laura Fontrodona; Montserrat Porta-de-la-Riva; Tomás Morán; Wei Niu; Mònica Díaz; David Aristizábal-Corrales; Alberto Villanueva; Simó Schwartz; Valerie Reinke; Julián Cerón
Journal:  PLoS Genet       Date:  2013-06-06       Impact factor: 5.917

8.  Splicing Machinery Facilitates Post-Transcriptional Regulation by FBFs and Other RNA-Binding Proteins in Caenorhabditis elegans Germline.

Authors:  Preston Novak; Xiaobo Wang; Mary Ellenbecker; Sara Feilzer; Ekaterina Voronina
Journal:  G3 (Bethesda)       Date:  2015-08-11       Impact factor: 3.154

9.  RNAi Screen Identifies Novel Regulators of RNP Granules in the Caenorhabditis elegans Germ Line.

Authors:  Megan P Wood; Angela Hollis; Ashley L Severance; Megan L Karrick; Jennifer A Schisa
Journal:  G3 (Bethesda)       Date:  2016-08-09       Impact factor: 3.154

10.  Insights into the Involvement of Spliceosomal Mutations in Myelodysplastic Disorders from Analysis of SACY-1/DDX41 in Caenorhabditis elegans.

Authors:  Tatsuya Tsukamoto; Micah D Gearhart; Seongseop Kim; Gemechu Mekonnen; Caroline A Spike; David Greenstein
Journal:  Genetics       Date:  2020-02-14       Impact factor: 4.562

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