Literature DB >> 18729020

DUBs and disease: activity assays for inhibitor development.

Anitha Shanmugham1, Huib Ovaa.   

Abstract

Deubiquitinating enzymes (DUBs) cleave ubiquitin from substrate proteins and so influence the biochemical properties of these proteins, such as their half-life, by a reduction in proteasomal degradation. Several DUBs have been demonstrated to deubiquitinate oncogenic proteins and tumor suppressors, and their activities have been implicated in numerous processes related to disease, including cancer and neurodegeneration. The importance of various DUBs is well established, but the understanding of both their selectivity and reactivity in the ubiquitin-proteasome system is comparatively poor. In this review, the published methods that are available to study DUB action in vitro and their application in finding inhibitors are discussed.

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Year:  2008        PMID: 18729020

Source DB:  PubMed          Journal:  Curr Opin Drug Discov Devel        ISSN: 1367-6733


  13 in total

1.  Characterization of selective ubiquitin and ubiquitin-like protease inhibitors using a fluorescence-based multiplex assay format.

Authors:  Xufan Tian; Nigora S Isamiddinova; Raymond J Peroutka; Seth J Goldenberg; Michael R Mattern; Benjamin Nicholson; Craig Leach
Journal:  Assay Drug Dev Technol       Date:  2010-12-06       Impact factor: 1.738

Review 2.  Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes.

Authors:  Francisca E Reyes-Turcu; Karen H Ventii; Keith D Wilkinson
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

Review 3.  DUBs at a glance.

Authors:  Keith D Wilkinson
Journal:  J Cell Sci       Date:  2009-07-15       Impact factor: 5.285

4.  Bioluminescence assay platform for selective and sensitive detection of Ub/Ubl proteases.

Authors:  Steven J Orcutt; Jian Wu; Michael J Eddins; Craig A Leach; James E Strickler
Journal:  Biochim Biophys Acta       Date:  2012-06-15

Review 5.  Deubiquitinases (DUBs) and DUB inhibitors: a patent review.

Authors:  Pershang Farshi; Rahul R Deshmukh; Joseph O Nwankwo; Richard T Arkwright; Boris Cvek; Jinbao Liu; Q Ping Dou
Journal:  Expert Opin Ther Pat       Date:  2015-06-16       Impact factor: 6.674

Review 6.  Atypical ubiquitylation - the unexplored world of polyubiquitin beyond Lys48 and Lys63 linkages.

Authors:  Yogesh Kulathu; David Komander
Journal:  Nat Rev Mol Cell Biol       Date:  2012-07-23       Impact factor: 94.444

7.  A general chemical ligation approach towards isopeptide-linked ubiquitin and ubiquitin-like assay reagents.

Authors:  Paul P Geurink; Farid El Oualid; Anika Jonker; Dharjath S Hameed; Huib Ovaa
Journal:  Chembiochem       Date:  2011-12-23       Impact factor: 3.164

8.  Lysine 92 amino acid residue of USP46, a gene associated with 'behavioral despair' in mice, influences the deubiquitinating enzyme activity.

Authors:  Wei Zhang; Qing-Bao Tian; Qing-Kai Li; Jian-Min Wang; Chao-Nan Wang; Tian Liu; Dian-Wu Liu; Ming-Wei Wang
Journal:  PLoS One       Date:  2011-10-17       Impact factor: 3.240

9.  A native chemical ligation handle that enables the synthesis of advanced activity-based probes: diubiquitin as a case study.

Authors:  Monique P C Mulder; Farid El Oualid; Jarno ter Beek; Huib Ovaa
Journal:  Chembiochem       Date:  2014-03-12       Impact factor: 3.164

10.  A novel reporter for real-time, quantitative imaging of AKT-directed K63-poly-ubiquitination in living cells.

Authors:  Shyam Nyati; Nauman Chaudhry; Areeb Chatur; Brandon S Gregg; Lauren Kimmel; Dheeraj Khare; Venkatesha Basrur; Dipankar Ray; Alnawaz Rehemtulla
Journal:  Oncotarget       Date:  2018-01-25
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