Literature DB >> 18727145

Photoactivatable GFP tagging cassettes for protein-tracking studies in the budding yeast Saccharomyces cerevisiae.

Christina Vorvis1, Steven M Markus, Wei-Lih Lee.   

Abstract

Yeast cell biologists use a variety of fluorescent protein tags for determining protein localization and for measuring protein dynamics using fluorescence recovery after photobleaching (FRAP). Although many modern fluorescent proteins, such as those with photoactivatable and photoconvertible characteristics, have been developed, none has been exploited for studies in budding yeast. We describe here the construction of yeast-tagging vectors containing photoactivatable green fluorescent protein (PA-GFP) for analysis of protein behaviour. We tagged two yeast proteins, Erg6p and Num1p, with PA-GFP and demonstrated specific photoactivation of the fusion proteins in live cells. Fluorescence intensity measurements showed that a short 5 s exposure to 413 nm light is sufficient to produce the maximum level of activated GFP fluorescence. Local photoactivation of cortical Num1p-PA-GFP showed movement of the marked proteins, providing new insights into the behaviour of Num1p at the cell cortex. Since photoactivation can be achieved using standard mercury arc illumination, the PA-GFP tag represents a convenient and economical way to determine protein dynamics in the cell. Thus, the tagging modules should facilitate protein-tracking studies in a wide variety of cell biological processes in yeast.

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Year:  2008        PMID: 18727145      PMCID: PMC4007248          DOI: 10.1002/yea.1611

Source DB:  PubMed          Journal:  Yeast        ISSN: 0749-503X            Impact factor:   3.239


  22 in total

1.  A photoactivatable GFP for selective photolabeling of proteins and cells.

Authors:  George H Patterson; Jennifer Lippincott-Schwartz
Journal:  Science       Date:  2002-09-13       Impact factor: 47.728

2.  Peripheral, non-centrosome-associated microtubules contribute to spindle formation in centrosome-containing cells.

Authors:  U S Tulu; N M Rusan; P Wadsworth
Journal:  Curr Biol       Date:  2003-10-28       Impact factor: 10.834

3.  Selective photolabeling of proteins using photoactivatable GFP.

Authors:  George H Patterson; Jennifer Lippincott-Schwartz
Journal:  Methods       Date:  2004-04       Impact factor: 3.608

Review 4.  Cloning of the late genes in the ergosterol biosynthetic pathway of Saccharomyces cerevisiae--a review.

Authors:  N D Lees; B Skaggs; D R Kirsch; M Bard
Journal:  Lipids       Date:  1995-03       Impact factor: 1.880

5.  The yeast gene ERG6 is required for normal membrane function but is not essential for biosynthesis of the cell-cycle-sparking sterol.

Authors:  R F Gaber; D M Copple; B K Kennedy; M Vidal; M Bard
Journal:  Mol Cell Biol       Date:  1989-08       Impact factor: 4.272

6.  Mutations in LIS1 (ERG6) gene confer increased sodium and lithium uptake in Saccharomyces cerevisiae.

Authors:  A A Welihinda; A D Beavis; R J Trumbly
Journal:  Biochim Biophys Acta       Date:  1994-07-13

7.  Global analysis of protein expression in yeast.

Authors:  Sina Ghaemmaghami; Won-Ki Huh; Kiowa Bower; Russell W Howson; Archana Belle; Noah Dephoure; Erin K O'Shea; Jonathan S Weissman
Journal:  Nature       Date:  2003-10-16       Impact factor: 49.962

Review 8.  Biochemical and physiological effects of sterol alterations in yeast--a review.

Authors:  L W Parks; S J Smith; J H Crowley
Journal:  Lipids       Date:  1995-03       Impact factor: 1.880

9.  Yeast Num1p associates with the mother cell cortex during S/G2 phase and affects microtubular functions.

Authors:  M Farkasovsky; H Küntzel
Journal:  J Cell Biol       Date:  1995-11       Impact factor: 10.539

10.  The role of the lissencephaly protein Pac1 during nuclear migration in budding yeast.

Authors:  Wei-Lih Lee; Jessica R Oberle; John A Cooper
Journal:  J Cell Biol       Date:  2003-02-03       Impact factor: 10.539

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  16 in total

1.  Cassette series designed for live-cell imaging of proteins and high-resolution techniques in yeast.

Authors:  Carissa L Young; David L Raden; Jeffrey L Caplan; Kirk J Czymmek; Anne S Robinson
Journal:  Yeast       Date:  2012-04-04       Impact factor: 3.239

2.  Regulated offloading of cytoplasmic dynein from microtubule plus ends to the cortex.

Authors:  Steven M Markus; Wei-Lih Lee
Journal:  Dev Cell       Date:  2011-05-17       Impact factor: 12.270

3.  Fission yeast myosin I facilitates PI(4,5)P2-mediated anchoring of cytoplasmic dynein to the cortex.

Authors:  Jerrin Mathew Thankachan; Stephen Sukumar Nuthalapati; Nireekshit Addanki Tirumala; Vaishnavi Ananthanarayanan
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-14       Impact factor: 11.205

4.  Quantitative analysis of Pac1/LIS1-mediated dynein targeting: Implications for regulation of dynein activity in budding yeast.

Authors:  Steven M Markus; Karen M Plevock; Bryan J St Germain; Jesse J Punch; Christopher W Meaden; Wei-Lih Lee
Journal:  Cytoskeleton (Hoboken)       Date:  2011-02-03

5.  Improved Plasmids for Fluorescent Protein Tagging of Microtubules in Saccharomyces cerevisiae.

Authors:  Steven M Markus; Safia Omer; Kaitlyn Baranowski; Wei-Lih Lee
Journal:  Traffic       Date:  2015-04-28       Impact factor: 6.215

Review 6.  Imaging protein dynamics in live mitotic cells.

Authors:  Nick P Ferenz; Nan Ma; Wei-Lih Lee; Patricia Wadsworth
Journal:  Methods       Date:  2010-01-18       Impact factor: 3.608

7.  Motor- and tail-dependent targeting of dynein to microtubule plus ends and the cell cortex.

Authors:  Steven M Markus; Jesse J Punch; Wei-Lih Lee
Journal:  Curr Biol       Date:  2009-01-29       Impact factor: 10.834

8.  A CAAX motif can compensate for the PH domain of Num1 for cortical dynein attachment.

Authors:  Xianying Tang; Jesse J Punch; Wei-Lih Lee
Journal:  Cell Cycle       Date:  2009-10-04       Impact factor: 4.534

9.  Tension-dependent nucleosome remodeling at the pericentromere in yeast.

Authors:  Jolien S Verdaasdonk; Ryan Gardner; Andrew D Stephens; Elaine Yeh; Kerry Bloom
Journal:  Mol Biol Cell       Date:  2012-05-16       Impact factor: 4.138

10.  Improved blue, green, and red fluorescent protein tagging vectors for S. cerevisiae.

Authors:  Sidae Lee; Wendell A Lim; Kurt S Thorn
Journal:  PLoS One       Date:  2013-07-02       Impact factor: 3.240

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