Literature DB >> 18726014

Transcription monitoring using fused RNA with a dye-binding light-up aptamer as a tag: a blue fluorescent RNA.

Shinsuke Sando1, Atsushi Narita, Masayoshi Hayami, Yasuhiro Aoyama.   

Abstract

The "light-up" RNA aptamer-Hoechst pair can be used as a fluorescent tag to monitor transcription processes.

Mesh：

Substances：

Year:  2008        PMID： 18726014     DOI： 10.1039/b808449a

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN： 1359-7345            Impact factor:   6.222


  28 in total

Review 1.  Aptamer-based fluorescent biosensors.

Authors:  R E Wang; Y Zhang; J Cai; W Cai; T Gao
Journal:  Curr Med Chem       Date:  2011       Impact factor: 4.530

Review 2.  Functional nucleic acid sensors.

Authors:  Juewen Liu; Zehui Cao; Yi Lu
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

3.  Dual-colour imaging of RNAs using quencher- and fluorophore-binding aptamers.

Authors:  Ankita Arora; Murat Sunbul; Andres Jäschke
Journal:  Nucleic Acids Res       Date:  2015-07-14       Impact factor: 16.971

Review 4.  Aptamer-based molecular imaging.

Authors:  Tianjiao Wang; Judhajeet Ray
Journal:  Protein Cell       Date:  2012-09-15       Impact factor: 14.870

Review 5.  RNA Localization in Bacteria.

Authors:  Jingyi Fei; Cynthia M Sharma
Journal:  Microbiol Spectr       Date:  2018-09

6.  Combining SELEX screening and rational design to develop light-up fluorophore-RNA aptamer pairs for RNA tagging.

Authors:  Jungjoon Lee; Kyung Hyun Lee; Jongho Jeon; Anca Dragulescu-Andrasi; Fei Xiao; Jianghong Rao
Journal:  ACS Chem Biol       Date:  2010-11-19       Impact factor: 5.100

7.  Understanding the photophysics of the spinach-DFHBI RNA aptamer-fluorogen complex to improve live-cell RNA imaging.

Authors:  Kyu Young Han; Benjamin J Leslie; Jingyi Fei; Jichuan Zhang; Taekjip Ha
Journal:  J Am Chem Soc       Date:  2013-12-10       Impact factor: 15.419

8.  Twisted cyanines: a non-planar fluorogenic dye with superior photostability and its use in a protein-based fluoromodule.

Authors:  Nathaniel I Shank; Ha H Pham; Alan S Waggoner; Bruce A Armitage
Journal:  J Am Chem Soc       Date:  2012-12-20       Impact factor: 15.419

9.  iSpinach: a fluorogenic RNA aptamer optimized for in vitro applications.

Authors:  Alexis Autour; Eric Westhof; Michael Ryckelynck
Journal:  Nucleic Acids Res       Date:  2016-03-01       Impact factor: 16.971

10.  Light-up and FRET aptamer reporters; evaluating their applications for imaging transcription in eukaryotic cells.

Authors:  Muslum Ilgu; Judhajeet Ray; Lee Bendickson; Tianjiao Wang; Ivan M Geraskin; George A Kraus; Marit Nilsen-Hamilton
Journal:  Methods       Date:  2015-12-17       Impact factor: 3.608
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