Literature DB >> 18725416

Molecular basis of the Bohr effect in arthropod hemocyanin.

Shun Hirota1, Takumi Kawahara, Mariano Beltramini, Paolo Di Muro, Richard S Magliozzo, Jack Peisach, Linda S Powers, Naoki Tanaka, Satoshi Nagao, Luigi Bubacco.   

Abstract

Flash photolysis and K-edge x-ray absorption spectroscopy (XAS) were used to investigate the functional and structural effects of pH on the oxygen affinity of three homologous arthropod hemocyanins (Hcs). Flash photolysis measurements showed that the well-characterized pH dependence of oxygen affinity (Bohr effect) is attributable to changes in the oxygen binding rate constant, k(on), rather than changes in k(off). In parallel, coordination geometry of copper in Hc was evaluated as a function of pH by XAS. It was found that the geometry of copper in the oxygenated protein is unchanged at all pH values investigated, while significant changes were observed for the deoxygenated protein as a function of pH. The interpretation of these changes was based on previously described correlations between spectral lineshape and coordination geometry obtained for model compounds of known structure (Blackburn, N. J., Strange, R. W., Reedijk, J., Volbeda, A., Farooq, A., Karlin, K. D., and Zubieta, J. (1989) Inorg. Chem., 28, 1349-1357). A pH-dependent change in the geometry of cuprous copper in the active site of deoxyHc, from pseudotetrahedral toward trigonal was assigned from the observed intensity dependence of the 1s --> 4p(z) transition in x-ray absorption near edge structure (XANES) spectra. The structural alteration correlated well with increase in oxygen affinity at alkaline pH determined in flash photolysis experiments. These results suggest that the oxygen binding rate in deoxyHc depends on the coordination geometry of Cu(I) and suggest a structural origin for the Bohr effect in arthropod Hcs.

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Year:  2008        PMID: 18725416      PMCID: PMC2581592          DOI: 10.1074/jbc.M803433200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  32 in total

1.  Subunit composition, x-ray diffraction, amino acid analysis and oxygen binding behaviour of Panulirus interruptus hemocyanin.

Authors:  H A Kuiper; W Gaastra; J J Beintema; E F van Bruggen; A M Schepman; J Drenth
Journal:  J Mol Biol       Date:  1975-12-25       Impact factor: 5.469

2.  Limulus polyphemus hemocyanin: 10 A cryo-EM structure, sequence analysis, molecular modelling and rigid-body fitting reveal the interfaces between the eight hexamers.

Authors:  Andreas G Martin; Frank Depoix; Michael Stohr; Ulrich Meissner; Silke Hagner-Holler; Kada Hammouti; Thorsten Burmester; Jochen Heyd; Willy Wriggers; Jürgen Markl
Journal:  J Mol Biol       Date:  2006-12-01       Impact factor: 5.469

3.  Letter: Molybdenum X-ray absorption edge spectra. The chemical state of molybdenum in nitrogenase.

Authors:  S P Cramer; T K Eccles; F W Kutzler; K O Hodgson; L E Mortenson
Journal:  J Am Chem Soc       Date:  1976-03-03       Impact factor: 15.419

4.  Analysis of the effect of three different allosteric ligands on oxygen binding by hemocyanin of the shrimp, Penaeus setiferus.

Authors:  M Brouwer; C Bonaventura; J Bonaventura
Journal:  Biochemistry       Date:  1978-05-30       Impact factor: 3.162

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Authors:  R L Jolley; L H Evans; N Makino; H S Mason
Journal:  J Biol Chem       Date:  1974-01-25       Impact factor: 5.157

6.  Root effect of Panulirus interruptus hemocyanin.

Authors:  H A Kuiper; M Coletta; L Zolla; E Chiancone; M Brunori
Journal:  Biochim Biophys Acta       Date:  1980-12-16

7.  Physical studies of hemocyanins. 3. Circular dichroism and absorption spectra.

Authors:  K E Van Holde
Journal:  Biochemistry       Date:  1967-01       Impact factor: 3.162

8.  Binding of urate and caffeine to hemocyanin of the lobster Homarus vulgaris (E.) as studied by isothermal titration calorimetry.

Authors:  M A Menze; N Hellmann; H Decker; M K Grieshaber
Journal:  Biochemistry       Date:  2000-09-05       Impact factor: 3.162

9.  Dioxygen binding to deoxyhemocyanin: electronic structure and mechanism of the spin-forbidden two-electron reduction of o(2).

Authors:  M Metz; E I Solomon
Journal:  J Am Chem Soc       Date:  2001-05-30       Impact factor: 15.419

10.  Comparison of the X-ray absorption properties of the binuclear active site of molluscan and arthropodan hemocyanins.

Authors:  A Sabatucci; I Ascone; L Bubacco; M Beltramini; DiP Muro; B Salvato
Journal:  J Biol Inorg Chem       Date:  2001-08-04       Impact factor: 3.358

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  6 in total

1.  CO and O2 binding to pseudo-tetradentate ligand-copper(I) complexes with a variable N-donor moiety: kinetic/thermodynamic investigation reveals ligand-induced changes in reaction mechanism.

Authors:  Heather R Lucas; Gerald J Meyer; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2010-09-22       Impact factor: 15.419

Review 2.  Copper active sites in biology.

Authors:  Edward I Solomon; David E Heppner; Esther M Johnston; Jake W Ginsbach; Jordi Cirera; Munzarin Qayyum; Matthew T Kieber-Emmons; Christian H Kjaergaard; Ryan G Hadt; Li Tian
Journal:  Chem Rev       Date:  2014-03-03       Impact factor: 60.622

3.  Structural basis of the lactate-dependent allosteric regulation of oxygen binding in arthropod hemocyanin.

Authors:  Shun Hirota; Naoki Tanaka; Ivan Micetic; Paolo Di Muro; Satoshi Nagao; Hiroaki Kitagishi; Koji Kano; Richard S Magliozzo; Jack Peisach; Mariano Beltramini; Luigi Bubacco
Journal:  J Biol Chem       Date:  2010-04-20       Impact factor: 5.157

4.  Laser-Induced Dynamics of Peroxodicopper(II) Complexes Vary with the Ligand Architecture. One-Photon Two-Electron O2 Ejection and Formation of Mixed-Valent Cu(I)Cu(II)-Superoxide Intermediates.

Authors:  Claudio Saracini; Kei Ohkubo; Tomoyoshi Suenobu; Gerald J Meyer; Kenneth D Karlin; Shunichi Fukuzumi
Journal:  J Am Chem Soc       Date:  2015-12-11       Impact factor: 15.419

5.  Ontogenetic changes in energetic reserves, digestive enzymes, amino acid and energy content of Lithodes santolla (Anomura: Lithodidae): Baseline for culture.

Authors:  Hernán Javier Sacristán; Jesica Romina Mufari; Rodrigo Antonio Lorenzo; Claudia Clementina Boy; Gustavo Alejandro Lovrich
Journal:  PLoS One       Date:  2020-05-13       Impact factor: 3.240

6.  European Lobster Larval Development and Fitness Under a Temperature Gradient and Ocean Acidification.

Authors:  Laura Leiva; Nelly Tremblay; Gabriela Torres; Maarten Boersma; Roland Krone; Luis Giménez
Journal:  Front Physiol       Date:  2022-07-14       Impact factor: 4.755

  6 in total

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