Literature DB >> 18720228

Computational and mathematical modeling of angiogenesis.

Shayn M Peirce1.   

Abstract

Over the past two decades, a number of mathematical and computational models have been developed to study different aspects of angiogenesis that span the spatial and temporal scales encompassed by this complex process. For example, models have been built to investigate how growth factors and receptors signal endothelial cell proliferation, how groups of endothelial cells assemble into individual vessels, and how tumors recruit the ingrowth of whole microvascular networks. A prudent question to pose is: "what have we learned from these models?" This review aims to answer this question as it pertains to angiogenesis in the context of normal physiological growth, tumorigenesis, wound healing, tissue engineering, and the design of therapeutic strategies. We also provide a framework for parsing angiogenesis models into categories, according to the type of modeling approach used, the spatial and temporal scales simulated, and the overarching question being posed to the model. Finally, this review introduces some of the simplification strategies and assumptions used in model building, discusses model validation, and makes recommendations for application of modeling approaches to unresolved questions in the field.

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Year:  2008        PMID: 18720228      PMCID: PMC3125711          DOI: 10.1080/10739680802220331

Source DB:  PubMed          Journal:  Microcirculation        ISSN: 1073-9688            Impact factor:   2.628


  30 in total

1.  Multicellular simulation predicts microvascular patterning and in silico tissue assembly.

Authors:  Shayn M Peirce; Eric J Van Gieson; Thomas C Skalak
Journal:  FASEB J       Date:  2004-02-06       Impact factor: 5.191

2.  Numerical simulations of angiogenesis in the cornea.

Authors:  S Tong; F Yuan
Journal:  Microvasc Res       Date:  2001-01       Impact factor: 3.514

3.  Analysis of the roles of microvessel endothelial cell random motility and chemotaxis in angiogenesis.

Authors:  C L Stokes; D A Lauffenburger
Journal:  J Theor Biol       Date:  1991-10-07       Impact factor: 2.691

Review 4.  Assays for angiogenesis: a review.

Authors:  R Auerbach; W Auerbach; I Polakowski
Journal:  Pharmacol Ther       Date:  1991       Impact factor: 12.310

Review 5.  Models for the study of angiogenesis.

Authors:  Yuji Shiba; Masafumi Takahashi; Uichi Ikeda
Journal:  Curr Pharm Des       Date:  2008       Impact factor: 3.116

6.  Diffusion with evolving sources and competing sinks: development of angiogenesis.

Authors:  M Scalerandi; B Capogrosso Sansone; C A Condat
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2001-12-14

7.  VEGF regulates cell behavior during vasculogenesis.

Authors:  C J Drake; A LaRue; N Ferrara; C D Little
Journal:  Dev Biol       Date:  2000-08-15       Impact factor: 3.582

8.  Emergence of taxis and synergy in angiogenesis.

Authors:  B Capogrosso Sansone; M Scalerandi; C A Condat
Journal:  Phys Rev Lett       Date:  2001-09-04       Impact factor: 9.161

9.  A computer algorithm describing the process of vessel formation and maturation, and its use for predicting the effects of anti-angiogenic and anti-maturation therapy on vascular tumor growth.

Authors:  L Arakelyan; V Vainstein; Z Agur
Journal:  Angiogenesis       Date:  2002       Impact factor: 9.596

10.  Migration of individual microvessel endothelial cells: stochastic model and parameter measurement.

Authors:  C L Stokes; D A Lauffenburger; S K Williams
Journal:  J Cell Sci       Date:  1991-06       Impact factor: 5.285

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  53 in total

Review 1.  How blood vessel networks are made and measured.

Authors:  John C Chappell; David M Wiley; Victoria L Bautch
Journal:  Cells Tissues Organs       Date:  2011-10-12       Impact factor: 2.481

Review 2.  Theoretical models for coronary vascular biomechanics: progress & challenges.

Authors:  Sarah L Waters; Jordi Alastruey; Daniel A Beard; Peter H M Bovendeerd; Peter F Davies; Girija Jayaraman; Oliver E Jensen; Jack Lee; Kim H Parker; Aleksander S Popel; Timothy W Secomb; Maria Siebes; Spencer J Sherwin; Rebecca J Shipley; Nicolas P Smith; Frans N van de Vosse
Journal:  Prog Biophys Mol Biol       Date:  2010-10-30       Impact factor: 3.667

Review 3.  Macrophages: An Inflammatory Link Between Angiogenesis and Lymphangiogenesis.

Authors:  Bruce A Corliss; Mohammad S Azimi; Jennifer M Munson; Shayn M Peirce; Walter L Murfee
Journal:  Microcirculation       Date:  2016-02       Impact factor: 2.628

Review 4.  Modeling structural adaptation of microcirculation.

Authors:  Axel R Pries; Timothy W Secomb
Journal:  Microcirculation       Date:  2008-11       Impact factor: 2.628

Review 5.  The microcirculation: physiology at the mesoscale.

Authors:  Timothy W Secomb; Axel R Pries
Journal:  J Physiol       Date:  2011-01-17       Impact factor: 5.182

Review 6.  Harnessing systems biology approaches to engineer functional microvascular networks.

Authors:  Lauren S Sefcik; Jennifer L Wilson; Jason A Papin; Edward A Botchwey
Journal:  Tissue Eng Part B Rev       Date:  2010-06       Impact factor: 6.389

Review 7.  Applications of computational models to better understand microvascular remodelling: a focus on biomechanical integration across scales.

Authors:  Walter L Murfee; Richard S Sweat; Ken-Ichi Tsubota; Feilim Mac Gabhann; Damir Khismatullin; Shayn M Peirce
Journal:  Interface Focus       Date:  2015-04-06       Impact factor: 3.906

8.  Retinal Artery-Vein Classification via Topology Estimation.

Authors:  Rolando Estrada; Michael J Allingham; Priyatham S Mettu; Scott W Cousins; Carlo Tomasi; Sina Farsiu
Journal:  IEEE Trans Med Imaging       Date:  2015-06-10       Impact factor: 10.048

9.  A viscoelastic model of blood capillary extension and regression: derivation, analysis, and simulation.

Authors:  Xiaoming Zheng; Chunjing Xie
Journal:  J Math Biol       Date:  2012-11-13       Impact factor: 2.259

Review 10.  Manipulating the microvasculature and its microenvironment.

Authors:  Laxminarayanan Krishnan; Carlos C Chang; Sara S Nunes; Stuart K Williams; Jeffrey A Weiss; James B Hoying
Journal:  Crit Rev Biomed Eng       Date:  2013
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