Literature DB >> 18719388

Lessons from microRNA mutants in worms, flies and mice.

Peter Smibert1, Eric C Lai.   

Abstract

It is apparent that microRNAs (miRNAs) are important components in the regulation of genetic networks in many biological contexts. Based on computational analysis, typical miRNAs are inferred to have tens to hundreds of conserved targets. Many miRNA-target interactions have been validated by various means, including heterologous tests in cultured cells and gain-of-function approaches that can yield striking phenotypes in whole animals. However, these strategies do not report on the endogenous importance of such miRNA activities. Likewise, studies of miRNA pathway mutants can suggest an endogenous role for miRNAs in a given setting, but do not identify roles for specific miRNAs. Therefore, these approaches must be complemented with the analysis of miRNA mutant alleles. In this review, we describe some of the lessons learned from studying miRNA gene deletions in worms, flies and mice, and discuss their implications for the control of endogenous regulatory networks.

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Year:  2008        PMID: 18719388      PMCID: PMC2683976          DOI: 10.4161/cc.7.16.6454

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  82 in total

1.  Identification and characterization of human BIC, a gene on chromosome 21 that encodes a noncoding RNA.

Authors:  W Tam
Journal:  Gene       Date:  2001-08-22       Impact factor: 3.688

2.  Micro RNAs are complementary to 3' UTR sequence motifs that mediate negative post-transcriptional regulation.

Authors:  Eric C Lai
Journal:  Nat Genet       Date:  2002-03-18       Impact factor: 38.330

3.  bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila.

Authors:  Julius Brennecke; David R Hipfner; Alexander Stark; Robert B Russell; Stephen M Cohen
Journal:  Cell       Date:  2003-04-04       Impact factor: 41.582

4.  siRNAs can function as miRNAs.

Authors:  John G Doench; Christian P Petersen; Phillip A Sharp
Journal:  Genes Dev       Date:  2003-02-15       Impact factor: 11.361

5.  The bantam gene regulates Drosophila growth.

Authors:  David R Hipfner; Katrin Weigmann; Stephen M Cohen
Journal:  Genetics       Date:  2002-08       Impact factor: 4.562

6.  A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans.

Authors:  Robert J Johnston; Oliver Hobert
Journal:  Nature       Date:  2003-12-14       Impact factor: 49.962

7.  The Caenorhabditis elegans hunchback-like gene lin-57/hbl-1 controls developmental time and is regulated by microRNAs.

Authors:  Juan E Abrahante; Aric L Daul; Ming Li; Mandy L Volk; Jason M Tennessen; Eric A Miller; Ann E Rougvie
Journal:  Dev Cell       Date:  2003-05       Impact factor: 12.270

8.  The C elegans hunchback homolog, hbl-1, controls temporal patterning and is a probable microRNA target.

Authors:  Shin-Yi Lin; Steven M Johnson; Mary Abraham; Monica C Vella; Amy Pasquinelli; Chiara Gamberi; Ellen Gottlieb; Frank J Slack
Journal:  Dev Cell       Date:  2003-05       Impact factor: 12.270

9.  The Drosophila microRNA Mir-14 suppresses cell death and is required for normal fat metabolism.

Authors:  Peizhang Xu; Stephanie Y Vernooy; Ming Guo; Bruce A Hay
Journal:  Curr Biol       Date:  2003-04-29       Impact factor: 10.834

10.  Temporal regulation of microRNA expression in Drosophila melanogaster mediated by hormonal signals and broad-Complex gene activity.

Authors:  Lorenzo F Sempere; Nicholas S Sokol; Edward B Dubrovsky; Edward M Berger; Victor Ambros
Journal:  Dev Biol       Date:  2003-07-01       Impact factor: 3.582

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  26 in total

1.  A genome-wide transgenic resource for conditional expression of Drosophila microRNAs.

Authors:  Fernando Bejarano; Diane Bortolamiol-Becet; Qi Dai; Kailiang Sun; Abil Saj; Yu-Ting Chou; David R Raleigh; Kevin Kim; Jian-Quan Ni; Hong Duan; Jr-Shiuan Yang; Tudor A Fulga; David Van Vactor; Norbert Perrimon; Eric C Lai
Journal:  Development       Date:  2012-06-28       Impact factor: 6.868

Review 2.  MicroRNAs of parasites: current status and future perspectives.

Authors:  Quan Liu; Wenbin Tuo; Hongwei Gao; Xing-Quan Zhu
Journal:  Parasitol Res       Date:  2010-06-08       Impact factor: 2.289

Review 3.  Exploiting Drosophila genetics to understand microRNA function and regulation.

Authors:  Qi Dai; Peter Smibert; Eric C Lai
Journal:  Curr Top Dev Biol       Date:  2012       Impact factor: 4.897

Review 4.  Navigating and mining modENCODE data.

Authors:  Nathan Boley; Kenneth H Wan; Peter J Bickel; Susan E Celniker
Journal:  Methods       Date:  2014-03-15       Impact factor: 3.608

5.  Co-activation of microRNAs by Zelda is essential for early Drosophila development.

Authors:  Shengbo Fu; Chung-Yi Nien; Hsiao-Lan Liang; Christine Rushlow
Journal:  Development       Date:  2014-04-24       Impact factor: 6.868

6.  miR-212 and miR-132 are required for epithelial stromal interactions necessary for mouse mammary gland development.

Authors:  Ahmet Ucar; Vida Vafaizadeh; Hubertus Jarry; Jan Fiedler; Petra A B Klemmt; Thomas Thum; Bernd Groner; Kamal Chowdhury
Journal:  Nat Genet       Date:  2010-11-07       Impact factor: 38.330

7.  Mei-P26 regulates the maintenance of ovarian germline stem cells by promoting BMP signaling.

Authors:  Yun Li; Jean Z Maines; Omür Y Tastan; Dennis M McKearin; Michael Buszczak
Journal:  Development       Date:  2012-03-21       Impact factor: 6.868

8.  Drosophila microRNAs 263a/b confer robustness during development by protecting nascent sense organs from apoptosis.

Authors:  Valérie Hilgers; Natascha Bushati; Stephen M Cohen
Journal:  PLoS Biol       Date:  2010-06-15       Impact factor: 8.029

Review 9.  Coupling transcriptional and post-transcriptional miRNA regulation in the control of cell fate.

Authors:  Reut Shalgi; Ran Brosh; Moshe Oren; Yitzhak Pilpel; Varda Rotter
Journal:  Aging (Albany NY)       Date:  2009-09-08       Impact factor: 5.682

10.  miR-9a prevents apoptosis during wing development by repressing Drosophila LIM-only.

Authors:  Fernando Bejarano; Peter Smibert; Eric C Lai
Journal:  Dev Biol       Date:  2009-11-26       Impact factor: 3.582

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