Literature DB >> 18718493

Nuclear architecture and gene regulation.

Elena Fedorova1, Daniele Zink.   

Abstract

The spatial organization of eukaryotic genomes in the cell nucleus is linked to their transcriptional regulation. In mammals, on which this review will focus, transcription-related chromatin positioning is regulated at the level of chromosomal sub-domains and individual genes. Most of the chromatin remains stably positioned during interphase. However, some loci display dynamic relocalizations upon transcriptional activation, which are dependent on nuclear actin and myosin. Transcription factors in association with chromatin modifying complexes seem to play a central role in regulating chromatin dynamics and positioning. Recent results obtained in this regard also give insight into the question how the different levels of transcriptional regulation are integrated and coordinated with other processes involved in gene expression. Corresponding findings will be discussed.

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Year:  2008        PMID: 18718493     DOI: 10.1016/j.bbamcr.2008.07.018

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  58 in total

1.  Deriving transcriptional programs and functional processes from gene expression databases.

Authors:  Jeffrey T Chang
Journal:  Bioinformatics       Date:  2012-03-08       Impact factor: 6.937

Review 2.  Chromosome territories.

Authors:  Thomas Cremer; Marion Cremer
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-03       Impact factor: 10.005

Review 3.  Epigenetic regulation of immune cell functions during post-septic immunosuppression.

Authors:  William F Carson; Karen A Cavassani; Yali Dou; Steven L Kunkel
Journal:  Epigenetics       Date:  2011-03-01       Impact factor: 4.528

Review 4.  Experimental strategies for studying transcription factor-DNA binding specificities.

Authors:  Marcel Geertz; Sebastian J Maerkl
Journal:  Brief Funct Genomics       Date:  2010-09-23       Impact factor: 4.241

5.  Three-dimensional architecture of tandem repeats in chicken interphase nucleus.

Authors:  Antonina Maslova; Anna Zlotina; Nadezhda Kosyakova; Marina Sidorova; Alla Krasikova
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

6.  Expression of sperm-specific protamines impairs bacterial and eukaryotic cell proliferation.

Authors:  Katharina Günther; Agnieszka Paradowska-Dogan; Birte Bärmann; Harald Klein; Christoph von Eichel-Streiber; Ricardo Hartley; Wolfgang Weidner; Rüdiger Behr; Klaus Steger
Journal:  Histochem Cell Biol       Date:  2015-02-04       Impact factor: 4.304

7.  Nucleoskeleton mechanics at a glance.

Authors:  Kris Noel Dahl; Agnieszka Kalinowski
Journal:  J Cell Sci       Date:  2011-03-01       Impact factor: 5.285

8.  Real-time visualization of chromatin modification in isolated nuclei.

Authors:  Luca Sardo; Angel Lin; Svetlana Khakhina; Lucas Beckman; Luis Ricon; Weam Elbezanti; Tara Jaison; Harshad Vishwasrao; Hari Shroff; Christopher Janetopoulos; Zachary A Klase
Journal:  J Cell Sci       Date:  2017-07-25       Impact factor: 5.285

9.  Fatty acid binding proteins have the potential to channel dietary fatty acids into enterocyte nuclei.

Authors:  Adriana Esteves; Anja Knoll-Gellida; Lucia Canclini; Maria Cecilia Silvarrey; Michèle André; Patrick J Babin
Journal:  J Lipid Res       Date:  2015-12-11       Impact factor: 5.922

10.  Non-specific interactions are sufficient to explain the position of heterochromatic chromocenters and nucleoli in interphase nuclei.

Authors:  S de Nooijer; J Wellink; B Mulder; T Bisseling
Journal:  Nucleic Acids Res       Date:  2009-04-09       Impact factor: 16.971

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