Literature DB >> 18716671

Signature-forecasting and early outbreak detection system.

Elena N Naumova1, Ian B Macneill.   

Abstract

Daily disease monitoring via a public health surveillance system provides valuable information on population risks. Efficient statistical tools for early detection of rapid changes in the disease incidence are a must for modern surveillance. The need for statistical tools for early detection of outbreaks that are not based on historical information is apparent. A system is discussed for monitoring cases of infections with a view to early detection of outbreaks and to forecasting the extent of detected outbreaks. We propose a set of adaptive algorithms for early outbreak detection that does not rely on extensive historical recording. We also include knowledge of infection disease epidemiology into forecasts. To demonstrate this system we use data from the largest water-borne outbreak of cryptosporidiosis, which occurred in Milwaukee in 1993. Historical data are smoothed using a loess-type smoother. Upon receipt of a new datum, the smoothing is updated and estimates are made of the first two derivatives of the smooth curve, and these are used for near-term forecasting. Recent data and the near-term forecasts are used to compute a color-coded warning index, which quantify the level of concern. The algorithms for computing the warning index have been designed to balance Type I errors (false prediction of an epidemic) and Type II errors (failure to correctly predict an epidemic). If the warning index signals a sufficiently high probability of an epidemic, then a forecast of the possible size of the outbreak is made. This longer term forecast is made by fitting a 'signature' curve to the available data. The effectiveness of the forecast depends upon the extent to which the signature curve captures the shape of outbreaks of the infection under consideration.

Entities:  

Year:  2005        PMID: 18716671      PMCID: PMC2518402          DOI: 10.1002/env.734

Source DB:  PubMed          Journal:  Environmetrics        ISSN: 1099-095X            Impact factor:   1.900


  8 in total

1.  Use of passive surveillance data to study temporal and spatial variation in the incidence of giardiasis and cryptosporidiosis.

Authors:  E N Naumova; J T Chen; J K Griffiths; B T Matyas; S A Estes-Smargiassi; R D Morris
Journal:  Public Health Rep       Date:  2000 Sep-Oct       Impact factor: 2.792

2.  The association between extreme precipitation and waterborne disease outbreaks in the United States, 1948-1994.

Authors:  F C Curriero; J A Patz; J B Rose; S Lele
Journal:  Am J Public Health       Date:  2001-08       Impact factor: 9.308

3.  Did Milwaukee experience waterborne cryptosporidiosis before the large documented outbreak in 1993?

Authors:  R D Morris; E N Naumova; J K Griffiths
Journal:  Epidemiology       Date:  1998-05       Impact factor: 4.822

Review 4.  Epidemiologic aspects of human cryptosporidiosis and the role of waterborne transmission.

Authors:  P L Meinhardt; D P Casemore; K B Miller
Journal:  Epidemiol Rev       Date:  1996       Impact factor: 6.222

5.  Giardia and Cryptosporidium spp. in filtered drinking water supplies.

Authors:  M W LeChevallier; W D Norton; R G Lee
Journal:  Appl Environ Microbiol       Date:  1991-09       Impact factor: 4.792

6.  A massive outbreak in Milwaukee of cryptosporidium infection transmitted through the public water supply.

Authors:  W R Mac Kenzie; N J Hoxie; M E Proctor; M S Gradus; K A Blair; D E Peterson; J J Kazmierczak; D G Addiss; K R Fox; J B Rose
Journal:  N Engl J Med       Date:  1994-07-21       Impact factor: 91.245

7.  Global climate change and emerging infectious diseases.

Authors:  J A Patz; P R Epstein; T A Burke; J M Balbus
Journal:  JAMA       Date:  1996-01-17       Impact factor: 56.272

Review 8.  Climate variability and change in the United States: potential impacts on water- and foodborne diseases caused by microbiologic agents.

Authors:  J B Rose; P R Epstein; E K Lipp; B H Sherman; S M Bernard; J A Patz
Journal:  Environ Health Perspect       Date:  2001-05       Impact factor: 9.031

  8 in total
  8 in total

1.  Combinatorial decomposition of an outbreak signature.

Authors:  Nina H Fefferman; Elena N Naumova
Journal:  Math Biosci       Date:  2006-04-24       Impact factor: 2.144

2.  Time-distributed effect of exposure and infectious outbreaks.

Authors:  Elena N Naumova; Ian B Macneill
Journal:  Environmetrics       Date:  2008-06-02       Impact factor: 1.900

3.  Seasonal synchronization of influenza in the United States older adult population.

Authors:  Julia B Wenger; Elena N Naumova
Journal:  PLoS One       Date:  2010-04-15       Impact factor: 3.240

4.  Innovation in observation: a vision for early outbreak detection.

Authors:  Nh Fefferman; En Naumova
Journal:  Emerg Health Threats J       Date:  2010-05-20

5.  Signatures of Cholera Outbreak during the Yemeni Civil War, 2016-2019.

Authors:  Ryan B Simpson; Sofia Babool; Maia C Tarnas; Paulina M Kaminski; Meghan A Hartwick; Elena N Naumova
Journal:  Int J Environ Res Public Health       Date:  2021-12-30       Impact factor: 3.390

6.  Critical Periods, Critical Time Points and Day-of-the-Week Effects in COVID-19 Surveillance Data: An Example in Middlesex County, Massachusetts, USA.

Authors:  Ryan B Simpson; Brianna N Lauren; Kees H Schipper; James C McCann; Maia C Tarnas; Elena N Naumova
Journal:  Int J Environ Res Public Health       Date:  2022-01-25       Impact factor: 3.390

Review 7.  Investigating seasonal patterns in enteric infections: a systematic review of time series methods.

Authors:  Ryan B Simpson; Alexandra V Kulinkina; Elena N Naumova
Journal:  Epidemiol Infect       Date:  2022-02-14       Impact factor: 2.451

8.  Emergency room visits for respiratory conditions in children increased after Guagua Pichincha volcanic eruptions in April 2000 in Quito, Ecuador observational study: time series analysis.

Authors:  Elena N Naumova; Hugo Yepes; Jeffrey K Griffiths; Fernando Sempértegui; Gauri Khurana; Jyotsna S Jagai; Edgar Játiva; Bertha Estrella
Journal:  Environ Health       Date:  2007-07-24       Impact factor: 5.984

  8 in total

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