Literature DB >> 1870979

Chemical ligation of DNA: the first non-enzymatic assembly of a biologically active gene.

Z A Shabarova1, I N Merenkova, T S Oretskaya, N I Sokolova, E A Skripkin, E V Alexeyeva, A G Balakin, A A Bogdanov.   

Abstract

An artificial gene comprising 183 base pairs has been assembled by template-directed condensation of 35- to 53-membered oligodeoxyribo nucleotides with cyanogen bromide as a condensing agent. The reaction is complete within several minutes at 0 degrees C in buffer. The resulting mini-gene was cloned and expressed in vivo and in vitro. We have also found that the polymerase inhibition technique (toe-printing) is a good way to ascertain that translation initiation complexes form in the case of single-stranded DNAs as well. Thus, along with the fully chemical assembly of synthetic genes, a rapid and sufficiently reliable method for determining their ribosome-binding properties was developed.

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Year:  1991        PMID: 1870979      PMCID: PMC328569          DOI: 10.1093/nar/19.15.4247

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  12 in total

1.  [Localization of mRNA segments, screened by ribosomes in initiator complexes with the help of a reverse transcription reaction].

Authors:  A G Balakin; E A Skripkin; I N Shatskiĭ; Ia Van Duin; A A Bogdanov
Journal:  Dokl Akad Nauk SSSR       Date:  1989

2.  [Construction and expression of genes encoding short hybrid mRNA in Escherichia coli].

Authors:  E A Skripkin; S L Bogdanova; A M Kopylov; A A Bogdanov
Journal:  Dokl Akad Nauk SSSR       Date:  1986 Mar-Apr

3.  Extension inhibition analysis of translation initiation complexes.

Authors:  D Hartz; D S McPheeters; R Traut; L Gold
Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

Review 4.  Chemical development in the design of oligonucleotide probes for binding to DNA and RNA.

Authors:  Z A Shabarova
Journal:  Biochimie       Date:  1988-10       Impact factor: 4.079

5.  Total synthesis of the gene for an alanine transfer ribonucleic acid from yeast.

Authors:  K L Agarwal; H Büchi; M H Caruthers; N Gupta; H G Khorana; K Kleppe; A Kumar; E Ohtsuka; U L Rajbhandary; J H Van de Sande; V Sgaramella; H Weber; T Yamada
Journal:  Nature       Date:  1970-07-04       Impact factor: 49.962

6.  The complete nucleotide sequence of the arcaebacterial plasmid pHSB from Halobacterium, strain SB3.

Authors:  V K Kagramanova; N I Derckacheva; A S Mankin
Journal:  Nucleic Acids Res       Date:  1988-05-11       Impact factor: 16.971

7.  Expression of rRNA and tRNA genes in Escherichia coli: evidence for feedback regulation by products of rRNA operons.

Authors:  S Jinks-Robertson; R L Gourse; M Nomura
Journal:  Cell       Date:  1983-07       Impact factor: 41.582

8.  A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.

Authors:  J Messing; J Vieira
Journal:  Gene       Date:  1982-10       Impact factor: 3.688

9.  Site-directed modification of DNA duplexes by chemical ligation.

Authors:  N G Dolinnaya; N I Sokolova; O I Gryaznova; Z A Shabarova
Journal:  Nucleic Acids Res       Date:  1988-05-11       Impact factor: 16.971

10.  Chemical reactions within DNA duplexes. Cyanogen bromide as an effective oligodeoxyribonucleotide coupling agent.

Authors:  N I Sokolova; D T Ashirbekova; N G Dolinnaya; Z A Shabarova
Journal:  FEBS Lett       Date:  1988-05-09       Impact factor: 4.124

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  5 in total

1.  Use of single-stranded DNA oligonucleotides in programming ribosomes for translation.

Authors:  R D Ricker; A Kaji
Journal:  Nucleic Acids Res       Date:  1991-12-11       Impact factor: 16.971

2.  An orthogonal oligonucleotide protecting group strategy that enables assembly of repetitive or highly structured DNAs.

Authors:  Ulf M Lindström; Eric T Kool
Journal:  Nucleic Acids Res       Date:  2002-10-01       Impact factor: 16.971

Review 3.  Enzyme-free genetic copying of DNA and RNA sequences.

Authors:  Marilyne Sosson; Clemens Richert
Journal:  Beilstein J Org Chem       Date:  2018-03-12       Impact factor: 2.883

4.  Universal strategies for the DNA-encoding of libraries of small molecules using the chemical ligation of oligonucleotide tags.

Authors:  Alexander Litovchick; Matthew A Clark; Anthony D Keefe
Journal:  Artif DNA PNA XNA       Date:  2014

Review 5.  Modified nucleic acids: replication, evolution, and next-generation therapeutics.

Authors:  Karen Duffy; Sebastian Arangundy-Franklin; Philipp Holliger
Journal:  BMC Biol       Date:  2020-09-02       Impact factor: 7.431

  5 in total

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