Literature DB >> 18693807

Would SNOMED CT benefit from realism-based ontology evolution?

Werner M Ceusters1, Kent A Spackman, Barry Smith.   

Abstract

If SNOMED CT is to serve as a biomedical reference terminology, then steps must be taken to ensure comparability of information formulated using successive versions. New releases are therefore shipped with a history mechanism. We assessed the adequacy of this mechanism for its treatment of the distinction between changes occurring on the side of entities in reality and changes in our understanding thereof. We found that these two types are only partially distinguished and that a more detailed study is required to propose clear recommendations for enhancement along at least the following lines: (1) explicit representation of the provenance of a class; (2) separation of the time-period during which a component is stated valid in SNOMED CT from the period it is (or has been) valid in reality, and (3) redesign of the historical relationships table to give users better assistance for recovery in case of introduced mistakes.

Mesh:

Year:  2007        PMID: 18693807      PMCID: PMC2655780     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  10 in total

1.  An applied evaluation of SNOMED CT as a clinical vocabulary for the computerized diagnosis and problem list.

Authors:  Henry Wasserman; Jerome Wang
Journal:  AMIA Annu Symp Proc       Date:  2003

2.  Ontology-based error detection in SNOMED-CT.

Authors:  Werner Ceusters; Barry Smith; Anand Kumar; Christoffel Dhaen
Journal:  Stud Health Technol Inform       Date:  2004

3.  Anti-HIV agents. Saquinavir--switching from Fortovase to Invirase.

Authors: 
Journal:  TreatmentUpdate       Date:  2004 Apr-May

4.  Investigating subsumption in SNOMED CT: an exploration into large description logic-based biomedical terminologies.

Authors:  Olivier Bodenreider; Barry Smith; Anand Kumar; Anita Burgun
Journal:  Artif Intell Med       Date:  2007-01-22       Impact factor: 5.326

5.  A realism-based approach to the evolution of biomedical ontologies.

Authors:  Werner Ceusters; Barry Smith
Journal:  AMIA Annu Symp Proc       Date:  2006

6.  SNOMED-CT: The advanced terminology and coding system for eHealth.

Authors:  Kevin Donnelly
Journal:  Stud Health Technol Inform       Date:  2006

Review 7.  Desiderata for controlled medical vocabularies in the twenty-first century.

Authors:  J J Cimino
Journal:  Methods Inf Med       Date:  1998-11       Impact factor: 2.176

8.  SNOMED RT: a reference terminology for health care.

Authors:  K A Spackman; K E Campbell; R A Côté
Journal:  Proc AMIA Annu Fall Symp       Date:  1997

9.  The Ontology-Epistemology Divide: A Case Study in Medical Terminology.

Authors:  Olivier Bodenreider; Barry Smith; Anita Burgun
Journal:  Form Ontol Inf Syst       Date:  2004

10.  Evaluation of the content coverage of SNOMED CT: ability of SNOMED clinical terms to represent clinical problem lists.

Authors:  Peter L Elkin; Steven H Brown; Casey S Husser; Brent A Bauer; Dietlind Wahner-Roedler; S Trent Rosenbloom; Ted Speroff
Journal:  Mayo Clin Proc       Date:  2006-06       Impact factor: 7.616

  10 in total
  9 in total

1.  Ontological realism: A methodology for coordinated evolution of scientific ontologies.

Authors:  Barry Smith; Werner Ceusters
Journal:  Appl Ontol       Date:  2010-11-15       Impact factor: 1.115

2.  Applying Evolutionary Terminology Auditing to SNOMED CT.

Authors:  Werner Ceusters
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

3.  Putting biomedical ontologies to work.

Authors:  B Smith; M Brochhausen
Journal:  Methods Inf Med       Date:  2010-02-05       Impact factor: 2.176

4.  A unified framework for biomedical terminologies and ontologies.

Authors:  Werner Ceusters; Barry Smith
Journal:  Stud Health Technol Inform       Date:  2010

5.  SNOMED CT's RF2: Is the future bright?

Authors:  Werner Ceusters
Journal:  Stud Health Technol Inform       Date:  2011

6.  Assessing the Need for Semantic Data Integration for Surgical Biobanks-A Knowledge Representation Perspective.

Authors:  Mathias Brochhausen; Justin M Whorton; Cilia E Zayas; Monica P Kimbrell; Sarah J Bost; Nitya Singh; Christoph Brochhausen; Kevin W Sexton; Bernd Blobel
Journal:  J Pers Med       Date:  2022-05-07

7.  Structural group-based auditing of missing hierarchical relationships in UMLS.

Authors:  Yan Chen; Huanying Helen Gu; Yehoshua Perl; James Geller
Journal:  J Biomed Inform       Date:  2008-08-20       Impact factor: 6.317

8.  Foundations for a realist ontology of mental disease.

Authors:  Werner Ceusters; Barry Smith
Journal:  J Biomed Semantics       Date:  2010-12-09

9.  OnEX: Exploring changes in life science ontologies.

Authors:  Michael Hartung; Toralf Kirsten; Anika Gross; Erhard Rahm
Journal:  BMC Bioinformatics       Date:  2009-08-13       Impact factor: 3.169

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.