Literature DB >> 18693758

Structural properties of plant and mammalian lipoxygenases. Temperature-dependent conformational alterations and membrane binding ability.

Giampiero Mei1, Almerinda Di Venere, Eleonora Nicolai, Clotilde B Angelucci, Igor Ivanov, Annalaura Sabatucci, Enrico Dainese, Hartmut Kuhn, Mauro Maccarrone.   

Abstract

Lipoxygenases form a heterogeneous family of lipid peroxidizing enzymes, which have been implicated in the synthesis of inflammatory mediators, in cell development and in the pathogenesis of various diseases with major health and political relevance (atherosclerosis, osteoporosis). The crystal structures of various lipoxygenase-isoforms have been reported, and X-ray coordinates for enzyme-ligand complexes are also available. Although the 3D-structures of plant and animal lipoxygenase-isoforms are very similar, recent small-angle X-ray scattering data suggested a higher degree of motional flexibility of mammalian isozymes in aqueous solutions. To explore the molecular basis for these differences we performed dynamic fluorescence measurements that allowed us to study temperature-induced conformational changes arising from three-dimensional fluctuations of the protein matrix. For this purpose, we first investigated the impact of elevated temperature on activity, secondary structure, tertiary structure dynamics and conformational alterations. Applying fluorescence resonance energy transfer we also tested the membrane binding properties of the two lipoxygenase-isoforms, and compared their binding parameters. Taken together, our results indicate that the rabbit 12/15-lipoxygenase is more susceptible to temperature-induced structural alterations than the soybean enzyme. Moreover, the rabbit enzyme exhibits a higher degree of conformational flexibility of the entire protein molecule (global flexibility) and offers the possibility of augmented substrate movement at the catalytic center (local flexibility).

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Year:  2008        PMID: 18693758     DOI: 10.1021/bi800638v

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  6 in total

1.  New insight into the interaction of TRAF2 C-terminal domain with lipid raft microdomains.

Authors:  Arianna Ceccarelli; Almerinda Di Venere; Eleonora Nicolai; Anastasia De Luca; Nicola Rosato; Enrico Gratton; Giampiero Mei; Anna Maria Caccuri
Journal:  Biochim Biophys Acta Mol Cell Biol Lipids       Date:  2017-05-09       Impact factor: 4.698

2.  Stability of lipids in plasma and serum: Effects of temperature-related storage conditions on the human lipidome.

Authors:  Gregory B Reis; Jon C Rees; Anna A Ivanova; Zsuzsanna Kuklenyik; Nathan M Drew; James L Pirkle; John R Barr
Journal:  J Mass Spectrom Adv Clin Lab       Date:  2021-10-19

Review 3.  Mammalian lipoxygenases and their biological relevance.

Authors:  Hartmut Kuhn; Swathi Banthiya; Klaus van Leyen
Journal:  Biochim Biophys Acta       Date:  2014-10-12

4.  Impact of embedded endocannabinoids and their oxygenation by lipoxygenase on membrane properties.

Authors:  Enrico Dainese; Annalaura Sabatucci; Clotilde B Angelucci; Daniela Barsacchi; Marco Chiarini; Mauro Maccarrone
Journal:  ACS Chem Neurosci       Date:  2012-02-24       Impact factor: 4.418

5.  Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1.

Authors:  Hye-Yeoung Yun; Jinhyuk Lee; Hyunmin Kim; Hyojung Ryu; Ho-Chul Shin; Byung-Ha Oh; Bonsu Ku; Seung Jun Kim
Journal:  PLoS One       Date:  2018-05-23       Impact factor: 3.240

6.  Correlation spectroscopy and molecular dynamics simulations to study the structural features of proteins.

Authors:  Antonio Varriale; Anna Marabotti; Giampiero Mei; Maria Staiano; Sabato D'Auria
Journal:  PLoS One       Date:  2013-06-04       Impact factor: 3.240

  6 in total

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