Literature DB >> 18687684

Replacement of a phenylalanine by a tyrosine in the active site confers fructose-6-phosphate aldolase activity to the transaldolase of Escherichia coli and human origin.

Sarah Schneider1, Tatyana Sandalova, Gunter Schneider, Georg A Sprenger, Anne K Samland.   

Abstract

Based on a structure-assisted sequence alignment we designed 11 focused libraries at residues in the active site of transaldolase B from Escherichia coli and screened them for their ability to synthesize fructose 6-phosphate from dihydroxyacetone and glyceraldehyde 3-phosphate using a newly developed color assay. We found one positive variant exhibiting a replacement of Phe(178) to Tyr. This mutant variant is able not only to transfer a dihydroxyacetone moiety from a ketose donor, fructose 6-phosphate, onto an aldehyde acceptor, erythrose 4-phosphate (14 units/mg), but to use it as a substrate directly in an aldolase reaction (7 units/mg). With a single amino acid replacement the fructose-6-phosphate aldolase activity was increased considerably (>70-fold compared with wild-type). Structural studies of the wild-type and mutant protein suggest that this is due to a different H-bond pattern in the active site leading to a destabilization of the Schiff base intermediate. Furthermore, we show that a homologous replacement has a similar effect in the human transaldolase Taldo1 (aldolase activity, 14 units/mg). We also demonstrate that both enzymes TalB and Taldo1 are recognized by the same polyclonal antibody.

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Year:  2008        PMID: 18687684      PMCID: PMC2662071          DOI: 10.1074/jbc.M803184200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  39 in total

1.  Crystal structure of decameric fructose-6-phosphate aldolase from Escherichia coli reveals inter-subunit helix swapping as a structural basis for assembly differences in the transaldolase family.

Authors:  Stina Thorell; Melanie Schürmann; Georg A Sprenger; Gunter Schneider
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

2.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

3.  Site-saturation mutagenesis is more efficient than DNA shuffling for the directed evolution of beta-fucosidase from beta-galactosidase.

Authors:  Monal R Parikh; Ichiro Matsumura
Journal:  J Mol Biol       Date:  2005-09-23       Impact factor: 5.469

4.  Human transaldolase and cross-reactive viral epitopes identified by autoantibodies of multiple sclerosis patients.

Authors:  M Esposito; V Venkatesh; L Otvos; Z Weng; S Vajda; K Banki; A Perl
Journal:  J Immunol       Date:  1999-10-01       Impact factor: 5.422

5.  Crystal structure of the reduced Schiff-base intermediate complex of transaldolase B from Escherichia coli: mechanistic implications for class I aldolases.

Authors:  J Jia; U Schörken; Y Lindqvist; G A Sprenger; G Schneider
Journal:  Protein Sci       Date:  1997-01       Impact factor: 6.725

6.  A newborn with severe liver failure, cardiomyopathy and transaldolase deficiency.

Authors:  N M Verhoeven; M Wallot; J H J Huck; O Dirsch; A Ballauf; U Neudorf; G S Salomons; M S van der Knaap; T Voit; C Jakobs
Journal:  J Inherit Metab Dis       Date:  2005       Impact factor: 4.982

7.  Transaldolase B of Escherichia coli K-12: cloning of its gene, talB, and characterization of the enzyme from recombinant strains.

Authors:  G A Sprenger; U Schörken; G Sprenger; H Sahm
Journal:  J Bacteriol       Date:  1995-10       Impact factor: 3.490

8.  Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vector.

Authors:  J P Fürste; W Pansegrau; R Frank; H Blöcker; P Scholz; M Bagdasarian; E Lanka
Journal:  Gene       Date:  1986       Impact factor: 3.688

9.  Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.

Authors:  Koji Hayashi; Naoki Morooka; Yoshihiro Yamamoto; Katsutoshi Fujita; Katsumi Isono; Sunju Choi; Eiichi Ohtsubo; Tomoya Baba; Barry L Wanner; Hirotada Mori; Takashi Horiuchi
Journal:  Mol Syst Biol       Date:  2006-02-21       Impact factor: 11.429

10.  Oligodendrocyte-specific expression and autoantigenicity of transaldolase in multiple sclerosis.

Authors:  K Banki; E Colombo; F Sia; D Halladay; D H Mattson; A H Tatum; P T Massa; P E Phillips; A Perl
Journal:  J Exp Med       Date:  1994-11-01       Impact factor: 14.307

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  8 in total

1.  Improving upon nature: active site remodeling produces highly efficient aldolase activity toward hydrophobic electrophilic substrates.

Authors:  Manoj Cheriyan; Eric J Toone; Carol A Fierke
Journal:  Biochemistry       Date:  2012-02-16       Impact factor: 3.162

2.  Twisted Schiff base intermediates and substrate locale revise transaldolase mechanism.

Authors:  Anja Lehwess-Litzmann; Piotr Neumann; Christoph Parthier; Stefan Lüdtke; Ralph Golbik; Ralf Ficner; Kai Tittmann
Journal:  Nat Chem Biol       Date:  2011-08-21       Impact factor: 15.040

3.  Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism.

Authors:  Luke R Thompson; Qinglu Zeng; Libusha Kelly; Katherine H Huang; Alexander U Singer; Joanne Stubbe; Sallie W Chisholm
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-15       Impact factor: 11.205

Review 4.  DHAP-dependent aldolases from (hyper)thermophiles: biochemistry and applications.

Authors:  Pierpaolo Falcicchio; Suzanne Wolterink-Van Loo; Maurice C R Franssen; John van der Oost
Journal:  Extremophiles       Date:  2013-10-29       Impact factor: 2.395

Review 5.  Computational tools for rational protein engineering of aldolases.

Authors:  Michael Widmann; Jürgen Pleiss; Anne K Samland
Journal:  Comput Struct Biotechnol J       Date:  2012-11-13       Impact factor: 7.271

Review 6.  Engineering aldolases as biocatalysts.

Authors:  Claire L Windle; Marion Müller; Adam Nelson; Alan Berry
Journal:  Curr Opin Chem Biol       Date:  2014-01-04       Impact factor: 8.822

7.  Glycylglycine plays critical roles in the proliferation of spermatogonial stem cells.

Authors:  Bo Xu; Xiang Wei; Minjian Chen; Kaipeng Xie; Yuqing Zhang; Zhenyao Huang; Tianyu Dong; Weiyue Hu; Kun Zhou; Xiumei Han; Xin Wu; Yankai Xia
Journal:  Mol Med Rep       Date:  2019-08-23       Impact factor: 2.952

8.  Transaldolase in Bacillus methanolicus: biochemical characterization and biological role in ribulose monophosphate cycle.

Authors:  Johannes Pfeifenschneider; Benno Markert; Jessica Stolzenberger; Trygve Brautaset; Volker F Wendisch
Journal:  BMC Microbiol       Date:  2020-03-24       Impact factor: 3.605

  8 in total

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