Literature DB >> 18684657

Identifying essential genes in Arabidopsis thaliana.

David Meinke1, Rosanna Muralla, Colleen Sweeney, Allan Dickerman.   

Abstract

Eight years after publication of the Arabidopsis genome sequence and two years before completing the first phase of an international effort to characterize the function of every Arabidopsis gene, plant biologists remain unable to provide a definitive answer to the following basic question: what is the minimal gene set required for normal growth and development? The purpose of this review is to summarize different strategies employed to identify essential genes in Arabidopsis, an important component of the minimal gene set in plants, to present an overview of the datasets and specific genes identified to date, and to discuss the prospects for future saturation of this important class of genes. The long-term goal of this collaborative effort is to facilitate basic research in plant biology and complement ongoing research with other model organisms.

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Year:  2008        PMID: 18684657     DOI: 10.1016/j.tplants.2008.06.003

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  107 in total

1.  The chloroplast ribosomal protein L21 gene is essential for plastid development and embryogenesis in Arabidopsis.

Authors:  Tuanzhang Yin; Gang Pan; Han Liu; Jian Wu; Yongpeng Li; Zhenxing Zhao; Tingdong Fu; Yongming Zhou
Journal:  Planta       Date:  2011-11-22       Impact factor: 4.116

2.  Global analysis of gene activity during Arabidopsis seed development and identification of seed-specific transcription factors.

Authors:  Brandon H Le; Chen Cheng; Anhthu Q Bui; Javier A Wagmaister; Kelli F Henry; Julie Pelletier; Linda Kwong; Mark Belmonte; Ryan Kirkbride; Steve Horvath; Gary N Drews; Robert L Fischer; Jack K Okamuro; John J Harada; Robert B Goldberg
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-12       Impact factor: 11.205

3.  Rational association of genes with traits using a genome-scale gene network for Arabidopsis thaliana.

Authors:  Insuk Lee; Bindu Ambaru; Pranjali Thakkar; Edward M Marcotte; Seung Y Rhee
Journal:  Nat Biotechnol       Date:  2010-01-31       Impact factor: 54.908

4.  Mitochondrial Pentatricopeptide Repeat Protein, EMB2794, Plays a Pivotal Role in NADH Dehydrogenase Subunit nad2 mRNA Maturation in Arabidopsis thaliana.

Authors:  Fernanda Marchetti; Maximiliano Cainzos; Sofía Shevtsov; Juan Pablo Córdoba; Laure Dora Sultan; Axel Brennicke; Mizuki Takenaka; Gabriela Pagnussat; Oren Ostersetzer-Biran; Eduardo Zabaleta
Journal:  Plant Cell Physiol       Date:  2020-06-01       Impact factor: 4.927

Review 5.  Pavement cells: a model system for non-transcriptional auxin signalling and crosstalks.

Authors:  Jisheng Chen; Fei Wang; Shiqin Zheng; Tongda Xu; Zhenbiao Yang
Journal:  J Exp Bot       Date:  2015-06-04       Impact factor: 6.992

6.  Overexpressing components of the nuclear transport apparatus causes severe growth symptoms in tobacco leaves.

Authors:  Clare Kemp; Alex Coleman; Graeme Wells; Geraint Parry
Journal:  Plant Signal Behav       Date:  2015

7.  Characteristics of Plant Essential Genes Allow for within- and between-Species Prediction of Lethal Mutant Phenotypes.

Authors:  John P Lloyd; Alexander E Seddon; Gaurav D Moghe; Matthew C Simenc; Shin-Han Shiu
Journal:  Plant Cell       Date:  2015-08-18       Impact factor: 11.277

8.  TRAUCO, a Trithorax-group gene homologue, is required for early embryogenesis in Arabidopsis thaliana.

Authors:  Felipe Aquea; Amal J Johnston; Paola Cañon; Ueli Grossniklaus; Patricio Arce-Johnson
Journal:  J Exp Bot       Date:  2010-01-29       Impact factor: 6.992

9.  Indispensable Roles of Plastids in Arabidopsis thaliana Embryogenesis.

Authors:  Shih-Chi Hsu; Mark F Belmonte; John J Harada; Kentaro Inoue
Journal:  Curr Genomics       Date:  2010-08       Impact factor: 2.236

10.  Integrating the genetic and physical maps of Arabidopsis thaliana: identification of mapped alleles of cloned essential (EMB) genes.

Authors:  David Meinke; Colleen Sweeney; Rosanna Muralla
Journal:  PLoS One       Date:  2009-10-08       Impact factor: 3.240

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