Literature DB >> 18680913

DUTPase-containing metaviridae LTR retrotransposons from the genome of Phanerochaete chrysosporium (Fungi: Basidiomycota).

O S Novikova1, A G Blinov.   

Abstract

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Year:  2008        PMID： 18680913     DOI： 10.1134/s1607672908030137

Source DB:  PubMed          Journal:  Dokl Biochem Biophys        ISSN： 1607-6729            Impact factor:   0.788


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  10 in total

1.  MEGA2: molecular evolutionary genetics analysis software.

Authors:  S Kumar; K Tamura; I B Jakobsen; M Nei
Journal:  Bioinformatics       Date:  2001-12       Impact factor: 6.937

Review 2.  Transposable elements.

Authors:  D J Finnegan
Journal:  Curr Opin Genet Dev       Date:  1992-12       Impact factor: 5.578

Review 3.  A genomic perspective on the chromodomain-containing retrotransposons: Chromoviruses.

Authors:  Dusan Kordis
Journal:  Gene       Date:  2005-02-24       Impact factor: 3.688

4.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

Review 7.  The role of retroviral dUTPases in replication and virulence.

Authors:  S L Payne; J H Elder
Journal:  Curr Protein Pept Sci       Date:  2001-12       Impact factor: 3.272

Review 8.  Roles of uracil-DNA glycosylase and dUTPase in virus replication.

Authors:  Renxiang Chen; Huating Wang; Louis M Mansky
Journal:  J Gen Virol       Date:  2002-10       Impact factor: 3.891

9.  Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78.

Authors:  Diego Martinez; Luis F Larrondo; Nik Putnam; Maarten D Sollewijn Gelpke; Katherine Huang; Jarrod Chapman; Kevin G Helfenbein; Preethi Ramaiya; J Chris Detter; Frank Larimer; Pedro M Coutinho; Bernard Henrissat; Randy Berka; Dan Cullen; Daniel Rokhsar
Journal:  Nat Biotechnol       Date:  2004-05-02       Impact factor: 54.908

Review 10.  The diversity of LTR retrotransposons.

Authors:  Ericka R Havecker; Xiang Gao; Daniel F Voytas
Journal:  Genome Biol       Date:  2004-05-18       Impact factor: 13.583
  10 in total
  3 in total

1.  Ortervirales: New Virus Order Unifying Five Families of Reverse-Transcribing Viruses.

Authors:  Mart Krupovic; Jonas Blomberg; John M Coffin; Indranil Dasgupta; Hung Fan; Andrew D Geering; Robert Gifford; Balázs Harrach; Roger Hull; Welkin Johnson; Jan F Kreuze; Dirk Lindemann; Carlos Llorens; Ben Lockhart; Jens Mayer; Emmanuelle Muller; Neil E Olszewski; Hanu R Pappu; Mikhail M Pooggin; Katja R Richert-Pöggeler; Sead Sabanadzovic; Hélène Sanfaçon; James E Schoelz; Susan Seal; Livia Stavolone; Jonathan P Stoye; Pierre-Yves Teycheney; Michael Tristem; Eugene V Koonin; Jens H Kuhn
Journal:  J Virol       Date:  2018-05-29       Impact factor: 5.103

2.  Evolutionary genomics revealed interkingdom distribution of Tcn1-like chromodomain-containing Gypsy LTR retrotransposons among fungi and plants.

Authors:  Olga Novikova; Georgiy Smyshlyaev; Alexander Blinov
Journal:  BMC Genomics       Date:  2010-04-08       Impact factor: 3.969

3.  Network dynamics of eukaryotic LTR retroelements beyond phylogenetic trees.

Authors:  Carlos Llorens; Alfonso Muñoz-Pomer; Lucia Bernad; Hector Botella; Andrés Moya
Journal:  Biol Direct       Date:  2009-11-02       Impact factor: 4.540
  3 in total

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