Literature DB >> 18676650

Chirality-based signatures of local protein environments in two-dimensional optical spectroscopy of two species photosynthetic complexes of green sulfur bacteria: simulation study.

Dmitri V Voronine1, Darius Abramavicius, Shaul Mukamel.   

Abstract

Two-dimensional electronic chirality-induced signals of excitons in the photosynthetic Fenna-Matthews-Olson complex from two species of green sulfur bacteria (Chlorobium tepidum and Prosthecochloris aestuarii) are compared. The spectra are predicted to provide sensitive probes of local protein environment of the constituent bacteriochlorophyll a chromophores and reflect electronic structure variations (site energies and couplings) of the two complexes. Pulse polarization configurations are designed that can separate the coherent and incoherent exciton dynamics contributions to the two-dimensional spectra.

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Year:  2008        PMID: 18676650      PMCID: PMC2576374          DOI: 10.1529/biophysj.108.134387

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Multidimensional femtosecond correlation spectroscopies of electronic and vibrational excitations.

Authors:  S Mukamel
Journal:  Annu Rev Phys Chem       Date:  2000       Impact factor: 12.703

Review 3.  Many-body approaches for simulating coherent nonlinear spectroscopies of electronic and vibrational excitons.

Authors:  Shaul Mukamel; Darius Abramavicius
Journal:  Chem Rev       Date:  2004-04       Impact factor: 60.622

4.  The quantitative relationship between structure and polarized spectroscopy in the FMO complex of Prosthecochloris aestuarii: refining experiments and simulations.

Authors:  Markus Wendling; Milosz A Przyjalgowski; Demet Gülen; Simone I E Vulto; Thijs J Aartsma; Rienk van Grondelle; Herbert van Amerongen
Journal:  Photosynth Res       Date:  2002       Impact factor: 3.573

5.  Two-dimensional spectroscopy of electronic couplings in photosynthesis.

Authors:  Tobias Brixner; Jens Stenger; Harsha M Vaswani; Minhaeng Cho; Robert E Blankenship; Graham R Fleming
Journal:  Nature       Date:  2005-03-31       Impact factor: 49.962

6.  Coherent control of cross-peaks in chirality-induced two-dimensional optical signals of excitons.

Authors:  Dmitri V Voronine; Darius Abramavicius; Shaul Mukamel
Journal:  J Chem Phys       Date:  2006-12-14       Impact factor: 3.488

7.  Chirality-induced signals in coherent multidimensional spectroscopy of excitons.

Authors:  Darius Abramavicius; Shaul Mukamel
Journal:  J Chem Phys       Date:  2006-01-21       Impact factor: 3.488

8.  Evidence for wavelike energy transfer through quantum coherence in photosynthetic systems.

Authors:  Gregory S Engel; Tessa R Calhoun; Elizabeth L Read; Tae-Kyu Ahn; Tomás Mancal; Yuan-Chung Cheng; Robert E Blankenship; Graham R Fleming
Journal:  Nature       Date:  2007-04-12       Impact factor: 49.962

Review 9.  Coherent multidimensional optical spectroscopy of excitons in molecular aggregates; quasiparticle versus supermolecule perspectives.

Authors:  Darius Abramavicius; Benoit Palmieri; Dmitri V Voronine; Frantisek Sanda; Shaul Mukamel
Journal:  Chem Rev       Date:  2009-06       Impact factor: 60.622

10.  Quadrupole contribution to the third-order optical activity spectroscopy.

Authors:  Jun-Ho Choi; Minhaeng Cho
Journal:  J Chem Phys       Date:  2007-07-14       Impact factor: 3.488

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  5 in total

1.  Exciton dynamics in chromophore aggregates with correlated environment fluctuations.

Authors:  Darius Abramavicius; Shaul Mukamel
Journal:  J Chem Phys       Date:  2011-05-07       Impact factor: 3.488

2.  Coherent control protocol for separating energy-transfer pathways in photosynthetic complexes by chiral multidimensional signals.

Authors:  Dmitri V Voronine; Darius Abramavicius; Shaul Mukamel
Journal:  J Phys Chem A       Date:  2011-04-15       Impact factor: 2.781

Review 3.  Revisiting the optical properties of the FMO protein.

Authors:  Maaike T W Milder; Ben Brüggemann; Rienk van Grondelle; Jennifer L Herek
Journal:  Photosynth Res       Date:  2010-03-13       Impact factor: 3.573

4.  Exciton delocalization and transport in photosystem I of cyanobacteria Synechococcus elongates: simulation study of coherent two-dimensional optical signals.

Authors:  Darius Abramavicius; Shaul Mukamel
Journal:  J Phys Chem B       Date:  2009-04-30       Impact factor: 2.991

5.  Coherent multidimensional optical probes for electron correlations and exciton dynamics: from NMR to X-rays.

Authors:  Shaul Mukamel; Darius Abramavicius; Lijun Yang; Wei Zhuang; Igor V Schweigert; Dmitri V Voronine
Journal:  Acc Chem Res       Date:  2009-04-21       Impact factor: 22.384

  5 in total

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