Literature DB >> 18676495

Proposals to clarify how type strains are deposited and made available to the scientific community for the purpose of systematic research.

B J Tindall1, G M Garrity.   

Abstract

The principle of designating type material in codes of nomenclature in support of taxonomic descriptions is an important aspect in linking the names of taxa to the descriptions and the biological material to which they are meant to refer. In the case of species and subspecies type strains, one can examine those strains physically and carry out appropriate experimental work to confirm existing findings or expand on the dataset. As such, the availability of such strains is of central importance in a comparative science. The present article examines a number of issues relating to the availability of this important material and raises a series of points for public debate.

Mesh:

Year:  2008        PMID: 18676495     DOI: 10.1099/ijs.0.2008/006155-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  Species delimitation in taxonomically difficult fungi: the case of Hymenogaster.

Authors:  Benjamin Stielow; Zoltan Bratek; Akos Kund I Orczán; Szabolcs Rudnoy; Gunnar Hensel; Peter Hoffmann; Hans-Peter Klenk; Markus Göker
Journal:  PLoS One       Date:  2011-01-25       Impact factor: 3.240

2.  Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project.

Authors:  Nikos C Kyrpides; Tanja Woyke; Jonathan A Eisen; George Garrity; Timothy G Lilburn; Brian J Beck; William B Whitman; Phil Hugenholtz; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2013-12-17

3.  The role of genomics in the identification, prediction, and prevention of biological threats.

Authors:  W Florian Fricke; David A Rasko; Jacques Ravel
Journal:  PLoS Biol       Date:  2009-10-26       Impact factor: 8.029

4.  Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains.

Authors:  Nikos C Kyrpides; Philip Hugenholtz; Jonathan A Eisen; Tanja Woyke; Markus Göker; Charles T Parker; Rudolf Amann; Brian J Beck; Patrick S G Chain; Jongsik Chun; Rita R Colwell; Antoine Danchin; Peter Dawyndt; Tom Dedeurwaerdere; Edward F DeLong; John C Detter; Paul De Vos; Timothy J Donohue; Xiu-Zhu Dong; Dusko S Ehrlich; Claire Fraser; Richard Gibbs; Jack Gilbert; Paul Gilna; Frank Oliver Glöckner; Janet K Jansson; Jay D Keasling; Rob Knight; David Labeda; Alla Lapidus; Jung-Sook Lee; Wen-Jun Li; Juncai Ma; Victor Markowitz; Edward R B Moore; Mark Morrison; Folker Meyer; Karen E Nelson; Moriya Ohkuma; Christos A Ouzounis; Norman Pace; Julian Parkhill; Nan Qin; Ramon Rossello-Mora; Johannes Sikorski; David Smith; Mitch Sogin; Rick Stevens; Uli Stingl; Ken-Ichiro Suzuki; Dorothea Taylor; Jim M Tiedje; Brian Tindall; Michael Wagner; George Weinstock; Jean Weissenbach; Owen White; Jun Wang; Lixin Zhang; Yu-Guang Zhou; Dawn Field; William B Whitman; George M Garrity; Hans-Peter Klenk
Journal:  PLoS Biol       Date:  2014-08-05       Impact factor: 8.029

5.  LINbase: a web server for genome-based identification of prokaryotes as members of crowdsourced taxa.

Authors:  Long Tian; Chengjie Huang; Reza Mazloom; Lenwood S Heath; Boris A Vinatzer
Journal:  Nucleic Acids Res       Date:  2020-07-02       Impact factor: 16.971

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.