Literature DB >> 18676459

Rubellimicrobium mesophilum sp. nov., a mesophilic, pigmented bacterium isolated from soil.

Syed G Dastager1, Jae-Chan Lee, Yoon-Jung Ju, Dong-Jin Park, Chang-Jin Kim.   

Abstract

A pink- to light-reddish-pigmented, aerobic, pointed, budding, mesophilic strain designated MSL-20T was isolated from soil from Bigeum island, Korea. The isolate was Gram-negative. Cells were motile rods without flagella. The temperature and pH for growth were 20-37 degrees C (optimum 28 degrees C) and pH 7.0-11.0 (optimum pH 7.0+/-0.2). Q-10 was the predominant respiratory ubiquinone. The major fatty acids were C16:0 (37 %), C18: 1 omega7c (36 %) and 11-methyl C18:1 omega7c (12 %). Phylogenetic analysis based on the 16S rRNA gene sequence revealed that Rubellimicrobium thermophilum DSM 16684T was its closest neighbour (95.2 % similarity); the isolate had less than 97.0 % similarity to all species with validly published names. Chemotaxonomic data were determined for this isolate, including peptidoglycan type, diagnostic sugar composition, fatty acid profiles, ubiquinones and polar lipids; the results supported the affiliation of strain MSL-20T to the genus Rubellimicrobium. The DNA G+C content was 72.3 mol%. On the basis of the phenotypic, chemotaxonomic and phylogenetic data, strain MSL-20(T) represents a novel species of the genus Rubellimicrobium, for which the name Rubellimicrobium mesophilum sp. nov. is proposed. The type strain is MSL-20T (=KCTC 22012T =DSM 19309T).

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Year:  2008        PMID: 18676459     DOI: 10.1099/ijs.0.65590-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  6 in total

1.  Bacterial indicator of agricultural management for soil under no-till crop production.

Authors:  Eva L M Figuerola; Leandro D Guerrero; Silvina M Rosa; Leandro Simonetti; Matías E Duval; Juan A Galantini; José C Bedano; Luis G Wall; Leonardo Erijman
Journal:  PLoS One       Date:  2012-11-30       Impact factor: 3.240

2.  Rapid phylogenetic and functional classification of short genomic fragments with signature peptides.

Authors:  Joel Berendzen; William J Bruno; Judith D Cohn; Nicolas W Hengartner; Cheryl R Kuske; Benjamin H McMahon; Murray A Wolinsky; Gary Xie
Journal:  BMC Res Notes       Date:  2012-08-28

3.  Genome sequence of the pink to light reddish-pigmented Rubellimicrobium mesophilum type strain (DSM 19309(T)), a representative of the Roseobacter group isolated from soil, and emended description of the species.

Authors:  Thomas Riedel; Stefan Spring; Anne Fiebig; Jörn Petersen; Markus Göker; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2014-03-20

4.  A highly diverse, desert-like microbial biocenosis on solar panels in a Mediterranean city.

Authors:  Pedro Dorado-Morales; Cristina Vilanova; Juli Peretó; Francisco M Codoñer; Daniel Ramón; Manuel Porcar
Journal:  Sci Rep       Date:  2016-07-05       Impact factor: 4.379

5.  Understanding the phyllosphere microbiome assemblage in grape species (Vitaceae) with amplicon sequence data structures.

Authors:  Prashant Singh; Sylvain Santoni; Audrey Weber; Patrice This; Jean-Pierre Péros
Journal:  Sci Rep       Date:  2019-10-04       Impact factor: 4.379

6.  Bacterial and Archaeal Structural Diversity in Several Biodeterioration Patterns on the Limestone Walls of the Old Cathedral of Coimbra.

Authors:  Catarina Coelho; Nuno Mesquita; Inês Costa; Fabiana Soares; João Trovão; Helena Freitas; António Portugal; Igor Tiago
Journal:  Microorganisms       Date:  2021-03-30
  6 in total

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