Literature DB >> 18672889

Automated resolution of nontarget analyte signals in GC x GC-TOFMS data using parallel factor analysis.

Jamin C Hoggard1, Robert E Synovec.   

Abstract

We previously reported a method for the automated (objective) selection of a PARAFAC model having an appropriate number of factors for mathematical resolution of signal from a target analyte in GC x GC-TOFMS data (i.e., for an analysis in which the identity of the analyte is known a priori). While the previous target method has been successfully applied in several studies, the target method requires that the identity of the analyte be known. Also, multiple applications of the target method are required in cases where several analytes of interest are present in a single subsection of the chromatogram. Thus, having to know the analyte identity a priori restricts the applicability of the automated implementation of PARAFAC. The method presented in this report generalizes the previous method to allow analysis of one or more nontarget analyte signals in a subsection of a GC x GC-TOFMS chromatogram (i.e., for analyses when identities of analyte and interferences are not known a priori), thereby addressing and overcoming the limitations of the target method. Herein, we put the nontarget analyte PARAFAC method into theoretical context and illustrate the mechanics of the method using simulated data. We use real experimental GC x GC-TOFMS data to demonstrate the broad applicability of the method, with various analysis situations selected to illustrate challenging chemical analysis scenarios.

Year:  2008        PMID: 18672889     DOI: 10.1021/ac800624e

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  6 in total

1.  Development and application of a comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry method for the analysis of L-beta-methylamino-alanine in human tissue.

Authors:  Laura R Snyder; Jamin C Hoggard; Thomas J Montine; Robert E Synovec
Journal:  J Chromatogr A       Date:  2010-05-17       Impact factor: 4.759

2.  Toward a global analysis of metabolites in regulatory mutants of yeast.

Authors:  Elizabeth M Humston; Kenneth M Dombek; Benjamin P Tu; Elton T Young; Robert E Synovec
Journal:  Anal Bioanal Chem       Date:  2011-03-17       Impact factor: 4.142

3.  Investigation of interpolation techniques for the reconstruction of the first dimension of comprehensive two-dimensional liquid chromatography-diode array detector data.

Authors:  Robert C Allen; Sarah C Rutan
Journal:  Anal Chim Acta       Date:  2011-06-23       Impact factor: 6.558

4.  Comparison of GC-MS and GC×GC-MS in the analysis of human serum samples for biomarker discovery.

Authors:  Jason H Winnike; Xiaoli Wei; Kevin J Knagge; Steven D Colman; Simon G Gregory; Xiang Zhang
Journal:  J Proteome Res       Date:  2015-03-16       Impact factor: 4.466

5.  Semi-automated non-target processing in GC × GC-MS metabolomics analysis: applicability for biomedical studies.

Authors:  Maud M Koek; Frans M van der Kloet; Robert Kleemann; Teake Kooistra; Elwin R Verheij; Thomas Hankemeier
Journal:  Metabolomics       Date:  2010-07-15       Impact factor: 4.290

6.  Quantitative metabolomics based on gas chromatography mass spectrometry: status and perspectives.

Authors:  Maud M Koek; Renger H Jellema; Jan van der Greef; Albert C Tas; Thomas Hankemeier
Journal:  Metabolomics       Date:  2010-11-16       Impact factor: 4.290

  6 in total

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