Literature DB >> 18672793

[Regulation of gene expression in type II restriction-modification system].

M O Nagornykh, E S Bogdanova, A S Protsenko, M V Zakharova, A S Solonin, K V Severinov.   

Abstract

Type II restriction-modification systems are comprised of a restriction endonuclease and methyltransferase. The enzymes are coded by individual genes and recognize the same DNA sequence. Endonuclease makes a double-stranded break in the recognition site, and methyltransferase covalently modifies the DNA bases within the recognition site, thereby down-regulating endonuclease activity. Coordinated action of these enzymes plays a role of primitive immune system and protects bacterial host cell from the invasion of foreign (for example, viral) DNA. However, uncontrolled expression of the restriction-modification system genes can result in the death of bacterial host cell because of the endonuclease cleavage of host DNA. In the present review, the data on the expression regulation of the type II restriction-modification enzymes are discussed.

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Year:  2008        PMID: 18672793     DOI: 10.1134/s1022795408050037

Source DB:  PubMed          Journal:  Genetika        ISSN: 0016-6758


  50 in total

1.  Cellular responses to postsegregational killing by restriction-modification genes.

Authors:  N Handa; A Ichige; K Kusano; I Kobayashi
Journal:  J Bacteriol       Date:  2000-04       Impact factor: 3.490

2.  Transcriptional analysis and regulation of expression of the ScrFI restriction-modification system of Lactococcus lactis subsp. cremoris UC503.

Authors:  D Butler; G F Fitzgerald
Journal:  J Bacteriol       Date:  2001-08       Impact factor: 3.490

Review 3.  Leaderless mRNAs in bacteria: surprises in ribosomal recruitment and translational control.

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Journal:  Mol Microbiol       Date:  2002-01       Impact factor: 3.501

4.  Sequence and characterization of pvuIIR, the PvuII endonuclease gene, and of pvuIIC, its regulatory gene.

Authors:  T Tao; R M Blumenthal
Journal:  J Bacteriol       Date:  1992-05       Impact factor: 3.490

5.  Characterization of the cloned BamHI restriction modification system: its nucleotide sequence, properties of the methylase, and expression in heterologous hosts.

Authors:  J E Brooks; P D Nathan; D Landry; L A Sznyter; P Waite-Rees; C L Ives; L S Moran; B E Slatko; J S Benner
Journal:  Nucleic Acids Res       Date:  1991-02-25       Impact factor: 16.971

6.  Structure of the lambda complex at 2.5 A resolution: details of the repressor-operator interactions.

Authors:  S R Jordan; C O Pabo
Journal:  Science       Date:  1988-11-11       Impact factor: 47.728

7.  Regulation of EcoRII methyltransferase: effect of mutations on gene expression and in vitro binding to the promoter region.

Authors:  S Som; S Friedman
Journal:  Nucleic Acids Res       Date:  1994-12-11       Impact factor: 16.971

8.  Complex transcription of an operon encoding the SalI restriction-modification system of Streptomyces albus G.

Authors:  M A Alvarez; K F Chater; M R Rodicio
Journal:  Mol Microbiol       Date:  1993-04       Impact factor: 3.501

9.  Crystal structure of the restriction-modification system control element C.Bcll and mapping of its binding site.

Authors:  Michael R Sawaya; Zhenyu Zhu; Fana Mersha; Siu-Hong Chan; Rajesh Dabur; Shuang-Yong Xu; Ganesaratnam K Balendiran
Journal:  Structure       Date:  2005-12       Impact factor: 5.006

10.  Structural organization and regulation of the plasmid-borne type II restriction-modification system Kpn2I from Klebsiella pneumoniae RFL2.

Authors:  A Lubys; S Jurenaite; A Janulaitis
Journal:  Nucleic Acids Res       Date:  1999-11-01       Impact factor: 16.971

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  8 in total

1.  Understanding key features of bacterial restriction-modification systems through quantitative modeling.

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2.  Two novel type II restriction-modification systems occupying genomically equivalent locations on the chromosomes of Listeria monocytogenes strains.

Authors:  Sangmi Lee; T J Ward; R M Siletzky; S Kathariou
Journal:  Appl Environ Microbiol       Date:  2012-02-10       Impact factor: 4.792

3.  Controller protein of restriction-modification system Kpn2I affects transcription of its gene by acting as a transcription elongation roadblock.

Authors:  Evgeny Klimuk; Ekaterina Bogdanova; Max Nagornykh; Andjela Rodic; Marko Djordjevic; Sofia Medvedeva; Olga Pavlova; Konstantin Severinov
Journal:  Nucleic Acids Res       Date:  2018-11-16       Impact factor: 16.971

4.  Regulation of gene expression in restriction-modification system Eco29kI.

Authors:  Maxim Nagornykh; Marina Zakharova; Alexey Protsenko; Ekaterina Bogdanova; Alexander S Solonin; Konstantin Severinov
Journal:  Nucleic Acids Res       Date:  2011-02-09       Impact factor: 16.971

5.  Flexibility of the linker between the domains of DNA methyltransferase SsoII revealed by small-angle X-ray scattering: implications for transcription regulation in SsoII restriction-modification system.

Authors:  Petr V Konarev; Galina S Kachalova; Alexandra Yu Ryazanova; Elena A Kubareva; Anna S Karyagina; Hans D Bartunik; Dmitri I Svergun
Journal:  PLoS One       Date:  2014-04-07       Impact factor: 3.240

6.  Coordinated regulation of acid resistance in Escherichia coli.

Authors:  Patricia Aquino; Brent Honda; Suma Jaini; Anna Lyubetskaya; Krutika Hosur; Joanna G Chiu; Iriny Ekladious; Dongjian Hu; Lin Jin; Marianna K Sayeg; Arion I Stettner; Julia Wang; Brandon G Wong; Winnie S Wong; Stephen L Alexander; Cong Ba; Seth I Bensussen; David B Bernstein; Dana Braff; Susie Cha; Daniel I Cheng; Jang Hwan Cho; Kenny Chou; James Chuang; Daniel E Gastler; Daniel J Grasso; John S Greifenberger; Chen Guo; Anna K Hawes; Divya V Israni; Saloni R Jain; Jessica Kim; Junyu Lei; Hao Li; David Li; Qian Li; Christopher P Mancuso; Ning Mao; Salwa F Masud; Cari L Meisel; Jing Mi; Christine S Nykyforchyn; Minhee Park; Hannah M Peterson; Alfred K Ramirez; Daniel S Reynolds; Nae Gyune Rim; Jared C Saffie; Hang Su; Wendell R Su; Yaqing Su; Meng Sun; Meghan M Thommes; Tao Tu; Nitinun Varongchayakul; Tyler E Wagner; Benjamin H Weinberg; Rouhui Yang; Anastasia Yaroslavsky; Christine Yoon; Yanyu Zhao; Alicia J Zollinger; Anne M Stringer; John W Foster; Joseph Wade; Sahadaven Raman; Natasha Broude; Wilson W Wong; James E Galagan
Journal:  BMC Syst Biol       Date:  2017-01-06

7.  Systematic prediction of control proteins and their DNA binding sites.

Authors:  Valeriy Sorokin; Konstantin Severinov; Mikhail S Gelfand
Journal:  Nucleic Acids Res       Date:  2008-12-04       Impact factor: 16.971

8.  Identification of Three Type II Toxin-Antitoxin Systems in Model Bacterial Plant Pathogen Dickeya dadantii 3937.

Authors:  Lidia Boss; Marcin Górniak; Alicja Lewańczyk; Joanna Morcinek-Orłowska; Sylwia Barańska; Agnieszka Szalewska-Pałasz
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  8 in total

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