Literature DB >> 18669651

An allosteric model of calmodulin explains differential activation of PP2B and CaMKII.

Melanie I Stefan1, Stuart J Edelstein, Nicolas Le Novère.   

Abstract

Calmodulin plays a vital role in mediating bidirectional synaptic plasticity by activating either calcium/calmodulin-dependent protein kinase II (CaMKII) or protein phosphatase 2B (PP2B) at different calcium concentrations. We propose an allosteric model for calmodulin activation, in which binding to calcium facilitates the transition between a low-affinity [tense (T)] and a high-affinity [relaxed (R)] state. The four calcium-binding sites are assumed to be nonidentical. The model is consistent with previously reported experimental data for calcium binding to calmodulin. It also accounts for known properties of calmodulin that have been difficult to model so far, including the activity of nonsaturated forms of calmodulin (we predict the existence of open conformations in the absence of calcium), an increase in calcium affinity once calmodulin is bound to a target, and the differential activation of CaMKII and PP2B depending on calcium concentration.

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Year:  2008        PMID: 18669651      PMCID: PMC2504824          DOI: 10.1073/pnas.0804672105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  60 in total

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2.  Driving AMPA receptors into synapses by LTP and CaMKII: requirement for GluR1 and PDZ domain interaction.

Authors:  Y Hayashi; S H Shi; J A Esteban; A Piccini; J C Poncer; R Malinow
Journal:  Science       Date:  2000-03-24       Impact factor: 47.728

Review 3.  Calcineurin regulation of neuronal plasticity.

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Journal:  Biochem Biophys Res Commun       Date:  2003-11-28       Impact factor: 3.575

4.  Transition from reversible to persistent binding of CaMKII to postsynaptic sites and NR2B.

Authors:  K Ulrich Bayer; Eric LeBel; Greg L McDonald; Heather O'Leary; Howard Schulman; Paul De Koninck
Journal:  J Neurosci       Date:  2006-01-25       Impact factor: 6.167

5.  A mechanism for synaptic frequency detection through autophosphorylation of CaM kinase II.

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Journal:  Biophys J       Date:  1996-06       Impact factor: 4.033

6.  A mechanism for the Hebb and the anti-Hebb processes underlying learning and memory.

Authors:  J Lisman
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

7.  Structural dynamics in the C-terminal domain of calmodulin at low calcium levels.

Authors:  A Malmendal; J Evenäs; S Forsén; M Akke
Journal:  J Mol Biol       Date:  1999-11-05       Impact factor: 5.469

8.  Structure of calmodulin refined at 2.2 A resolution.

Authors:  Y S Babu; C E Bugg; W J Cook
Journal:  J Mol Biol       Date:  1988-11-05       Impact factor: 5.469

9.  Solution structure of calcium-free calmodulin.

Authors:  H Kuboniwa; N Tjandra; S Grzesiek; H Ren; C B Klee; A Bax
Journal:  Nat Struct Biol       Date:  1995-09

10.  Positive cooperative binding of calcium to bovine brain calmodulin.

Authors:  T H Crouch; C B Klee
Journal:  Biochemistry       Date:  1980-08-05       Impact factor: 3.162

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  38 in total

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Review 2.  Modeling intracellular signaling underlying striatal function in health and disease.

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Review 3.  Dysregulation of neuronal calcium homeostasis in Alzheimer's disease - A therapeutic opportunity?

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4.  Calmodulin transduces Ca2+ oscillations into differential regulation of its target proteins.

Authors:  Nikolai Slavov; Jannette Carey; Sara Linse
Journal:  ACS Chem Neurosci       Date:  2013-02-05       Impact factor: 4.418

5.  A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II.

Authors:  Shirley Pepke; Tamara Kinzer-Ursem; Stefan Mihalas; Mary B Kennedy
Journal:  PLoS Comput Biol       Date:  2010-02-12       Impact factor: 4.475

Review 6.  Relationships between structural dynamics and functional kinetics in oligomeric membrane receptors.

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Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

7.  Scalable rule-based modelling of allosteric proteins and biochemical networks.

Authors:  Julien F Ollivier; Vahid Shahrezaei; Peter S Swain
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8.  Lobe specific Ca2+-calmodulin nano-domain in neuronal spines: a single molecule level analysis.

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Journal:  PLoS Comput Biol       Date:  2010-11-11       Impact factor: 4.475

9.  Computing phenomenologic Adair-Klotz constants from microscopic MWC parameters.

Authors:  Melanie I Stefan; Stuart J Edelstein; Nicolas Le Novère
Journal:  BMC Syst Biol       Date:  2009-07-14

10.  Ligand depletion in vivo modulates the dynamic range and cooperativity of signal transduction.

Authors:  Stuart J Edelstein; Melanie I Stefan; Nicolas Le Novère
Journal:  PLoS One       Date:  2010-01-05       Impact factor: 3.240

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