Literature DB >> 18668358

Structure of the voltage dependent anion channel: state of the art.

Vito De Pinto1, Simona Reina, Francesca Guarino, Angela Messina.   

Abstract

The eukaryotic porin or Voltage Dependent Anion-selective Channels (VDAC) is the protein forming the aqueous pore channel in the mitochondrial outer membrane. It can modulate the energy-dependent metabolism of the cell forming a diffusion barrier to ions, adenine-nucleotides and other metabolites and it is probably involved in the regulation of apoptotic-relevant events. For these reasons, VDAC co-responsibility in unphysiological events leading to important pathologies such as onset or sustainment of cancer has been envisaged very early. The knowledge of the VDAC atomic structure is thus a relevant step in the design of modern drugs acting upon the mitochondrial function and its related apoptotic balance. This goal, despite many efforts, has not been gained until now. Several predictive or descriptive techniques have been employed to obtain models or representations of the pore-structure. The results obtained are reported in this review. The emerging picture arising from these many results is coherent and sufficiently informative. From these efforts it appears that VDAC is functionally monomeric but can cluster in tight but regular groups; it is asymmetric with larger exposed domains on the cytosolic side of the outer mitochondrial membrane; the diameter of the pore is between 2.5-3.0 nm and it is apparently free from obstructions (in the open state); the channel wall is mainly formed by typical amphipathic beta-strands; mobile components (the N-terminal ?) can have functional relevance to the pore regulation.

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Year:  2008        PMID: 18668358     DOI: 10.1007/s10863-008-9140-3

Source DB:  PubMed          Journal:  J Bioenerg Biomembr        ISSN: 0145-479X            Impact factor:   2.945


  62 in total

Review 1.  Toward the molecular structure of the mitochondrial channel, VDAC.

Authors:  C A Mannella; M Forte; M Colombini
Journal:  J Bioenerg Biomembr       Date:  1992-02       Impact factor: 2.945

2.  On the role of VDAC in apoptosis: fact and fiction.

Authors:  Tatiana K Rostovtseva; Wenzhi Tan; Marco Colombini
Journal:  J Bioenerg Biomembr       Date:  2005-06       Impact factor: 2.945

Review 3.  The voltage-dependent anion channel (VDAC): function in intracellular signalling, cell life and cell death.

Authors:  V Shoshan-Barmatz; A Israelson; D Brdiczka; S S Sheu
Journal:  Curr Pharm Des       Date:  2006       Impact factor: 3.116

4.  Voltage and pH-induced channel closure of porin OmpF visualized by atomic force microscopy.

Authors:  D J Müller; A Engel
Journal:  J Mol Biol       Date:  1999-01-29       Impact factor: 5.469

Review 5.  Molecular genetics of the VDAC ion channel: structural model and sequence analysis.

Authors:  M Forte; H R Guy; C A Mannella
Journal:  J Bioenerg Biomembr       Date:  1987-08       Impact factor: 2.945

6.  Bacterial expression and characterization of the mitochondrial outer membrane channel. Effects of n-terminal modifications.

Authors:  D A Koppel; K W Kinnally; P Masters; M Forte; E Blachly-Dyson; C A Mannella
Journal:  J Biol Chem       Date:  1998-05-29       Impact factor: 5.157

7.  Mitochondrial contact sites. Lipid composition and dynamics.

Authors:  D Ardail; J P Privat; M Egret-Charlier; C Levrat; F Lerme; P Louisot
Journal:  J Biol Chem       Date:  1990-11-05       Impact factor: 5.157

Review 8.  Warburg, me and Hexokinase 2: Multiple discoveries of key molecular events underlying one of cancers' most common phenotypes, the "Warburg Effect", i.e., elevated glycolysis in the presence of oxygen.

Authors:  Peter L Pedersen
Journal:  J Bioenerg Biomembr       Date:  2007-06       Impact factor: 2.945

9.  Identification of porin as a binding site for MAP2.

Authors:  M Lindén; G Karlsson
Journal:  Biochem Biophys Res Commun       Date:  1996-01-26       Impact factor: 3.575

10.  Voltage-dependent anion channels are dispensable for mitochondrial-dependent cell death.

Authors:  Christopher P Baines; Robert A Kaiser; Tatiana Sheiko; William J Craigen; Jeffery D Molkentin
Journal:  Nat Cell Biol       Date:  2007-04-08       Impact factor: 28.824

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  27 in total

1.  Affixing N-terminal α-helix to the wall of the voltage-dependent anion channel does not prevent its voltage gating.

Authors:  Oscar Teijido; Rachna Ujwal; Carl-Olof Hillerdal; Lisen Kullman; Tatiana K Rostovtseva; Jeff Abramson
Journal:  J Biol Chem       Date:  2012-01-24       Impact factor: 5.157

2.  Saccharomyces cerevisiae porin pore forms complexes with mitochondrial outer membrane proteins Om14p and Om45p.

Authors:  Susann Lauffer; Katrin Mäbert; Cornelia Czupalla; Theresia Pursche; Bernard Hoflack; Gerhard Rödel; Udo Krause-Buchholz
Journal:  J Biol Chem       Date:  2012-03-29       Impact factor: 5.157

Review 3.  The role of VDAC in cell death: friend or foe?

Authors:  Kyle S McCommis; Christopher P Baines
Journal:  Biochim Biophys Acta       Date:  2011-10-28

4.  [The role of the voltage-dependent anion channels in the outer membrane of mitochondria in the regulation of cellular metabolism].

Authors:  E L Kholmukhamedov; C Czerny; G Lovelace; K C Beeson; T Baker; C B Johnson; P Pediaditakis; V V Teplova; A Tikunov; J MacDonald; J J Lemasters
Journal:  Biofizika       Date:  2010 Sep-Oct

Review 5.  Reflections on VDAC as a voltage-gated channel and a mitochondrial regulator.

Authors:  Carmen A Mannella; Kathleen W Kinnally
Journal:  J Bioenerg Biomembr       Date:  2008-06       Impact factor: 2.945

6.  Acidification asymmetrically affects voltage-dependent anion channel implicating the involvement of salt bridges.

Authors:  Oscar Teijido; Shay M Rappaport; Adam Chamberlin; Sergei Y Noskov; Vicente M Aguilella; Tatiana K Rostovtseva; Sergey M Bezrukov
Journal:  J Biol Chem       Date:  2014-06-24       Impact factor: 5.157

7.  β-Barrel mobility underlies closure of the voltage-dependent anion channel.

Authors:  Ulrich Zachariae; Robert Schneider; Rodolfo Briones; Zrinka Gattin; Jean-Philippe Demers; Karin Giller; Elke Maier; Markus Zweckstetter; Christian Griesinger; Stefan Becker; Roland Benz; Bert L de Groot; Adam Lange
Journal:  Structure       Date:  2012-07-26       Impact factor: 5.006

8.  Proteomic Profiling of the Dystrophin-Deficient MDX Heart Reveals Drastically Altered Levels of Key Metabolic and Contractile Proteins.

Authors:  Caroline Lewis; Harald Jockusch; Kay Ohlendieck
Journal:  J Biomed Biotechnol       Date:  2010-05-23

Review 9.  Structural and functional link between the mitochondrial network and the endoplasmic reticulum.

Authors:  Carlotta Giorgi; Diego De Stefani; Angela Bononi; Rosario Rizzuto; Paolo Pinton
Journal:  Int J Biochem Cell Biol       Date:  2009-04-21       Impact factor: 5.085

10.  Downregulation of mitochondrial porin inhibits cell growth and alters respiratory phenotype in Trypanosoma brucei.

Authors:  Ujjal K Singha; Shvetank Sharma; Minu Chaudhuri
Journal:  Eukaryot Cell       Date:  2009-07-17
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