Literature DB >> 18666780

Rapid, microscale, acetyl bromide-based method for high-throughput determination of lignin content in Arabidopsis thaliana.

Xue Feng Chang1, Richard Chandra, Thomas Berleth, Rodger P Beatson.   

Abstract

The acetyl bromide method has been modified to enable the rapid microscale determination of lignin content in Arabidopsis with the goal of determining the genes that control lignin in plants. Modifications include reduction in sample size, use of a microball mill, adoption of a modified rapid method of extraction, use of an ice-bath to stabilize solutions and reduction in the volume of solutions. The microscale method was shown to be rapid, accurate and precise with values in agreement with those determined by the full-scale acetyl bromide method. The extinction coefficient for Arabidopsis lignin, dissolved using acetyl bromide, was determined to be 23.35 g(-1) L cm(-1) at 280 nm. This value is independent of the Arabidopsis accession, environmental growth conditions and is insensitive to lignin structure. The newly developed method can be used to determine lignin content in the inflorescence stems of Arabidopsis for mapping of lignin-related genes.

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Year:  2008        PMID: 18666780     DOI: 10.1021/jf800775f

Source DB:  PubMed          Journal:  J Agric Food Chem        ISSN: 0021-8561            Impact factor:   5.279


  35 in total

1.  Loss of FERULATE 5-HYDROXYLASE Leads to Mediator-Dependent Inhibition of Soluble Phenylpropanoid Biosynthesis in Arabidopsis.

Authors:  Nickolas A Anderson; Nicholas D Bonawitz; Kayleigh Nyffeler; Clint Chapple
Journal:  Plant Physiol       Date:  2015-06-05       Impact factor: 8.340

2.  Expression of a Trichoderma reesei β-1,4 endo-xylanase in tall fescue modifies cell wall structure and digestibility and elicits pathogen defence responses.

Authors:  Marcia M de O Buanafina; Tim Langdon; Sue Dalton; Phillip Morris
Journal:  Planta       Date:  2012-08-10       Impact factor: 4.116

3.  SG2-Type R2R3-MYB Transcription Factor MYB15 Controls Defense-Induced Lignification and Basal Immunity in Arabidopsis.

Authors:  William R Chezem; Altamash Memon; Fu-Shuang Li; Jing-Ke Weng; Nicole K Clay
Journal:  Plant Cell       Date:  2017-07-21       Impact factor: 11.277

4.  Engineering Monolignol p-Coumarate Conjugates into Poplar and Arabidopsis Lignins.

Authors:  Rebecca A Smith; Eliana Gonzales-Vigil; Steven D Karlen; Ji-Young Park; Fachuang Lu; Curtis G Wilkerson; Lacey Samuels; John Ralph; Shawn D Mansfield
Journal:  Plant Physiol       Date:  2015-10-28       Impact factor: 8.340

5.  Pleiotropic phenotypes of the sticky peel mutant provide new insight into the role of CUTIN DEFICIENT2 in epidermal cell function in tomato.

Authors:  Satya Swathi Nadakuduti; Mike Pollard; Dylan K Kosma; Charles Allen; John B Ohlrogge; Cornelius S Barry
Journal:  Plant Physiol       Date:  2012-05-22       Impact factor: 8.340

6.  Mediator Complex Subunits MED2, MED5, MED16, and MED23 Genetically Interact in the Regulation of Phenylpropanoid Biosynthesis.

Authors:  Whitney L Dolan; Brian P Dilkes; Jake M Stout; Nicholas D Bonawitz; Clint Chapple
Journal:  Plant Cell       Date:  2017-12-04       Impact factor: 11.277

7.  Functional co-expression of a fungal ferulic acid esterase and a β-1,4 endoxylanase in Festuca arundinacea (tall fescue) modifies post-harvest cell wall deconstruction.

Authors:  Marcia M de O Buanafina; Sue Dalton; Tim Langdon; E Timms-Taravella; Erica A Shearer; Phillip Morris
Journal:  Planta       Date:  2015-04-09       Impact factor: 4.116

8.  Lignin-based barrier restricts pathogens to the infection site and confers resistance in plants.

Authors:  Myoung-Hoon Lee; Hwi Seong Jeon; Seu Ha Kim; Joo Hee Chung; Daniele Roppolo; Hye-Jung Lee; Hong Joo Cho; Yuki Tobimatsu; John Ralph; Ohkmae K Park
Journal:  EMBO J       Date:  2019-09-26       Impact factor: 11.598

9.  Alteration of microbial communities colonizing leaf litter in a temperate woodland stream by growth of trees under conditions of elevated atmospheric CO2.

Authors:  John J Kelly; Amit Bansal; Jonathan Winkelman; Lori R Janus; Shannon Hell; Marie Wencel; Patricia Belt; Kevin A Kuehn; Steven T Rier; Nancy C Tuchman
Journal:  Appl Environ Microbiol       Date:  2010-06-11       Impact factor: 4.792

10.  Immunolocalization of hemicelluloses in Arabidopsis thaliana stem. Part II: Mannan deposition is regulated by phase of development and its patterns of temporal and spatial distribution differ between cell types.

Authors:  Jong Sik Kim; Geoffrey Daniel
Journal:  Planta       Date:  2012-06-21       Impact factor: 4.116

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