Literature DB >> 18662904

Crystal packing of a bacteriophage MS2 coat protein mutant corresponds to octahedral particles.

Pavel Plevka1, Kaspars Tars, Lars Liljas.   

Abstract

A covalent dimer of the bacteriophage MS2 coat protein was created by performing genetic fusion of two copies of the gene while removing the stop codon of the first gene. The dimer was crystallized in the cubic F432 space group. The organization of the asymmetric unit together with the F432 symmetry results in an arrangement of subunits that corresponds to T = 3 octahedral particles. The octahedral particles are probably artifacts created by the particular crystal packing. When it is not crystallized in the F cubic crystal form, the coat protein dimer appears to assemble into T = 3 icosahedral particles indistinguishable from the wild-type particles. To form an octahedral particle with closed surface, the dimer subunits interact at sharper angles than in the icosahedral arrangement. The fold of the covalent dimer is almost identical to the wild-type dimer with differences located in loops and in the covalent linker region. The main differences in the subunit packing between the octahedral and icosahedral arrangements are located close to the fourfold and fivefold symmetry axes where different sets of loops mediate the contacts. The volume of the wild-type virions is 7 times bigger than that of the octahedral particles.

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Year:  2008        PMID: 18662904      PMCID: PMC2548359          DOI: 10.1110/ps.036905.108

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  24 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-03       Impact factor: 11.205

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Journal:  Nucleic Acids Res       Date:  1996-06-15       Impact factor: 16.971

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Authors:  G J Kleywegt; T A Jones
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Authors:  K Valegård; L Liljas; K Fridborg; T Unge
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  7 in total

1.  Structure and stability of icosahedral particles of a covalent coat protein dimer of bacteriophage MS2.

Authors:  Pavel Plevka; Kaspars Tars; Lars Liljas
Journal:  Protein Sci       Date:  2009-08       Impact factor: 6.725

2.  Expression, purification, crystallization and preliminary crystallographic analysis of hepatitis B virus core protein dimerized via a peptide linker containing an EGFP insertion.

Authors:  Masaki Kikuchi; Shinichiro Iwabuchi; Tatsuhiko Kikkou; Keiichi Noguchi; Masafumi Odaka; Masafumi Yohda; Masaaki Kawata; Chikara Sato; Osamu Matsumoto
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-07-27

3.  Expression, purification, crystallization and preliminary X-ray crystallographic studies of hepatitis B virus core fusion protein corresponding to octahedral particles.

Authors:  Masaki Kikuchi; Shinichiro Iwabuchi; Tatsuhiko Kikkou; Keiichi Noguchi; Masafumi Odaka; Masafumi Yohda; Masaaki Kawata; Chikara Sato; Osamu Matsumoto
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-01-31

4.  Self-assembled lipid and membrane protein polyhedral nanoparticles.

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Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-30       Impact factor: 11.205

5.  In situ structures of the genome and genome-delivery apparatus in a single-stranded RNA virus.

Authors:  Xinghong Dai; Zhihai Li; Mason Lai; Sara Shu; Yushen Du; Z Hong Zhou; Ren Sun
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6.  Bacteriophage MS2 displays unreported capsid variability assembling T = 4 and mixed capsids.

Authors:  Natàlia de Martín Garrido; Michael A Crone; Kailash Ramlaul; Paul A Simpson; Paul S Freemont; Christopher H S Aylett
Journal:  Mol Microbiol       Date:  2019-11-05       Impact factor: 3.501

Review 7.  A novel delivery platform based on Bacteriophage MS2 virus-like particles.

Authors:  Yu Fu; Jinming Li
Journal:  Virus Res       Date:  2015-09-28       Impact factor: 3.303

  7 in total

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