Literature DB >> 18662797

Do DNA microarrays have their future behind them?

Jean-Yves Coppée1.   

Abstract

The first report on DNA microarray technology appeared in Science in 1995. Starting from gene expression profiling, its application fields have considerably evolved and extend from microbiology to cancer study. DNA microarrays are now routinely used for the detection of single nucleotide polymorphisms, microRNAs analysis, study of copy number variation, CpG methylations detection.... Furthermore, the approval of DNA microarray technology by US Food and Drug Administration has opened the door to new applications in clinical diagnostics. At the same time, DNA arrays have to face the concurrence of the latest generation of very high throughput sequencing devices which are predicted to make the microarray technology obsolete. This review will discuss on this paradoxical situation.

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Year:  2008        PMID: 18662797     DOI: 10.1016/j.micinf.2008.07.003

Source DB:  PubMed          Journal:  Microbes Infect        ISSN: 1286-4579            Impact factor:   2.700


  18 in total

Review 1.  Quality assurance of RNA expression profiling in clinical laboratories.

Authors:  Weihua Tang; Zhiyuan Hu; Hind Muallem; Margaret L Gulley
Journal:  J Mol Diagn       Date:  2011-10-20       Impact factor: 5.568

2.  Evaluation of one- and two-color gene expression arrays for microbial comparative genome hybridization analyses in routine applications.

Authors:  Roland Schwarz; Biju Joseph; Gabriele Gerlach; Anja Schramm-Glück; Kathrin Engelhard; Matthias Frosch; Tobias Müller; Christoph Schoen
Journal:  J Clin Microbiol       Date:  2010-06-30       Impact factor: 5.948

3.  Toxicogenomic activity of gemcitabine in two TP53-mutated bladder cancer cell lines: special focus on cell cycle-related genes.

Authors:  Glenda Nicioli da Silva; Elaine Aparecida de Camargo; Daisy Maria Favero Salvadori
Journal:  Mol Biol Rep       Date:  2012-10-09       Impact factor: 2.316

4.  MRE11A and SKP2 genes are associated with the increased cytotoxicity induced by the synergistic effects of cisplatin and gemcitabine in bladder cancer cells.

Authors:  Glenda Nicioli da Silva; Elaine Aparecida de Camargo; André Luiz Ventura Sávio; Daisy Maria Fávero Salvadori
Journal:  Mol Biol Rep       Date:  2014-03-21       Impact factor: 2.316

5.  Expression of genes related to apoptosis, cell cycle and signaling pathways are independent of TP53 status in urinary bladder cancer cells.

Authors:  Glenda N da Silva; Adriane F Evangelista; Danielle A Magalhães; Cláudia Macedo; Michelle C Búfalo; Elza T Sakamoto-Hojo; Geraldo A S Passos; Daisy M F Salvadori
Journal:  Mol Biol Rep       Date:  2010-11-30       Impact factor: 2.316

6.  Gemcitabine/Cisplatin Treatment Induces Concomitant SERTAD1, CDKN2B and GADD45A Modulation and Cellular Changes in Bladder Cancer Cells Regardless of the Site of TP53 Mutation.

Authors:  Glenda Nicioli da Silva; Leandro Toshio Filoni; Maria Cecília Salvadori; Daisy Maria Fávero Salvadori
Journal:  Pathol Oncol Res       Date:  2017-06-02       Impact factor: 3.201

7.  Analyzing mRNA expression using single mRNA resolution fluorescent in situ hybridization.

Authors:  Daniel Zenklusen; Robert H Singer
Journal:  Methods Enzymol       Date:  2010-03-01       Impact factor: 1.600

8.  Transcriptome analysis of porcine PBMCs after in vitro stimulation by LPS or PMA/ionomycin using an expression array targeting the pig immune response.

Authors:  Yu Gao; Laurence Flori; Jérome Lecardonnel; Diane Esquerré; Zhi-Liang Hu; Angélique Teillaud; Gaëtan Lemonnier; Francois Lefèvre; Isabelle P Oswald; Claire Rogel-Gaillard
Journal:  BMC Genomics       Date:  2010-05-11       Impact factor: 3.969

Review 9.  Using genome-wide expression profiling to define gene networks relevant to the study of complex traits: from RNA integrity to network topology.

Authors:  M A O'Brien; B N Costin; M F Miles
Journal:  Int Rev Neurobiol       Date:  2012       Impact factor: 3.230

10.  AGRONOMICS1: a new resource for Arabidopsis transcriptome profiling.

Authors:  Hubert Rehrauer; Catharine Aquino; Wilhelm Gruissem; Stefan R Henz; Pierre Hilson; Sascha Laubinger; Naira Naouar; Andrea Patrignani; Stephane Rombauts; Huan Shu; Yves Van de Peer; Marnik Vuylsteke; Detlef Weigel; Georg Zeller; Lars Hennig
Journal:  Plant Physiol       Date:  2009-12-23       Impact factor: 8.340

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