Literature DB >> 18661678

Identification of pink-pigmented bacteria isolated from environmental water samples and their biofilm formation abilities.

Katsunori Furuhata1, Yuko Kato, Keiichi Goto, Keiko Saitou, Jun-Ichi Sugiyama, Motonobu Hara, Masahumi Fukuyama.   

Abstract

Sixty-seven strains of pink-pigmented bacteria, which were isolated from environmental water samples collected nationwide, were identified by partial 16S rDNA sequence analysis. In addition, the biofilm formation ability of the isolates was experimentally investigated. We could identify only 2 strains at the species level: Pedobacter roseus HS-38 and Runella slithyformis HS-77. The results showed that of the strains tested, 22 strains (32.8%) were Pedobacter spp., which was most frequently identified, followed by 19 strains (28.4%) of Arcicella spp., 16 strains (23.9%) of Deinococcus spp., 5 strains (7.5%) of Roseomonas spp., 4 strains (6.0%) of Flectobacillus spp. and 1 strain (1.5%) of Runella sp. Most isolates showed low similarity values to previously known species, and they were found to be novel species. At a result, it was difficult to identify environmental water-derived pink-pigmented bacteria at the species level. On the other hand, when we measured the absorbance by the crystal violet staining to examine the quantities of biofilm formation of these strains, fifty-five (82.0%) of the 67 isolates formed biofilm. The absorbance of Deinococcus sp. HS-75 was the highest (3.56). When comparing the absorbance values among the genera, Roseomonas spp. showed the highest absorbance (mean:1.62), followed by Deinococcus spp. (mean: 1.03), and Arcicella spp. (mean: 1.01). Strains of Flectobacillus spp. (mean: 0.48) and Pedobacter spp. (mean: 0.42) showed lower absorbance values. As above, it was shown that, at the species level, the pink-pigmented bacteria in the water in the Japanese environment had various levels of ability to form biofilm.

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Year:  2008        PMID: 18661678     DOI: 10.4265/bio.13.33

Source DB:  PubMed          Journal:  Biocontrol Sci        ISSN: 1342-4815            Impact factor:   0.982


  2 in total

1.  Purification of high ammonia wastewater in a biofilm airlift loop bioreactor with microbial communities analysis.

Authors:  Chunsheng Qiu; Dandan Zhang; Liping Sun; Jianping Wen
Journal:  World J Microbiol Biotechnol       Date:  2014-10-25       Impact factor: 3.312

2.  Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)).

Authors:  Alex Copeland; Xiaojing Zhang; Monica Misra; Alla Lapidus; Matt Nolan; Susan Lucas; Shweta Deshpande; Jan-Fang Cheng; Roxanne Tapia; Lynne A Goodwin; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Ivanova; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Chongle Pan; Cynthia D Jeffries; John C Detter; Evelyne-Marie Brambilla; Manfred Rohde; Olivier D Ngatchou Djao; Markus Göker; Johannes Sikorski; Brian J Tindall; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Konstantinos Mavromatis
Journal:  Stand Genomic Sci       Date:  2012-05-04
  2 in total

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