Literature DB >> 18653755

Systems analysis of the single photon response in invertebrate photoreceptors.

Alain Pumir1, Jennifer Graves, Rama Ranganathan, Boris I Shraiman.   

Abstract

Photoreceptors of Drosophila compound eye employ a G protein-mediated signaling pathway that transduces single photons into transient electrical responses called "quantum bumps" (QB). Although most of the molecular components of this pathway are already known, the system-level understanding of the mechanism of QB generation has remained elusive. Here, we present a quantitative model explaining how QBs emerge from stochastic nonlinear dynamics of the signaling cascade. The model shows that the cascade acts as an "integrate and fire" device and explains how photoreceptors achieve reliable responses to light although keeping low background in the dark. The model predicts the nontrivial behavior of mutants that enhance or suppress signaling and explains the dependence on external calcium, which controls feedback regulation. The results provide insight into physiological questions such as single-photon response efficiency and the adaptation of response to high incident-light level. The system-level analysis enabled by modeling phototransduction provides a foundation for understanding G protein signaling pathways less amenable to quantitative approaches.

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Year:  2008        PMID: 18653755      PMCID: PMC2492478          DOI: 10.1073/pnas.0711884105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  Engineering aspects of enzymatic signal transduction: photoreceptors in the retina.

Authors:  P B Detwiler; S Ramanathan; A Sengupta; B I Shraiman
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

Review 2.  Visual transduction in Drosophila.

Authors:  R C Hardie; P Raghu
Journal:  Nature       Date:  2001-09-13       Impact factor: 49.962

Review 3.  G proteins and phototransduction.

Authors:  Vadim Y Arshavsky; Trevor D Lamb; Edward N Pugh
Journal:  Annu Rev Physiol       Date:  2002       Impact factor: 19.318

4.  Coding of sweet, bitter, and umami tastes: different receptor cells sharing similar signaling pathways.

Authors:  Yifeng Zhang; Mark A Hoon; Jayaram Chandrashekar; Ken L Mueller; Boaz Cook; Dianqing Wu; Charles S Zuker; Nicholas J P Ryba
Journal:  Cell       Date:  2003-02-07       Impact factor: 41.582

Review 5.  Calcium homeostasis in fly photoreceptor cells.

Authors:  Johannes Oberwinkler
Journal:  Adv Exp Med Biol       Date:  2002       Impact factor: 2.622

6.  Calcium transients in the rhabdomeres of dark- and light-adapted fly photoreceptor cells.

Authors:  J Oberwinkler; D G Stavenga
Journal:  J Neurosci       Date:  2000-03-01       Impact factor: 6.167

Review 7.  Phospholipase C-coupled receptors and activation of TRPC channels.

Authors:  M Trebak; L Lemonnier; J T Smyth; G Vazquez; J W Putney
Journal:  Handb Exp Pharmacol       Date:  2007

8.  Constitutive activity of the light-sensitive channels TRP and TRPL in the Drosophila diacylglycerol kinase mutant, rdgA.

Authors:  P Raghu; K Usher; S Jonas; S Chyb; A Polyanovsky; R C Hardie
Journal:  Neuron       Date:  2000-04       Impact factor: 17.173

9.  Molecular basis of amplification in Drosophila phototransduction: roles for G protein, phospholipase C, and diacylglycerol kinase.

Authors:  R C Hardie; F Martin; G W Cochrane; M Juusola; P Georgiev; P Raghu
Journal:  Neuron       Date:  2002-11-14       Impact factor: 17.173

Review 10.  TRP channels in Drosophila photoreceptors: the lipid connection.

Authors:  Roger C Hardie
Journal:  Cell Calcium       Date:  2003 May-Jun       Impact factor: 6.817

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  11 in total

1.  Phospholipase C-mediated suppression of dark noise enables single-photon detection in Drosophila photoreceptors.

Authors:  Ben Katz; Baruch Minke
Journal:  J Neurosci       Date:  2012-02-22       Impact factor: 6.167

Review 2.  Phototransduction motifs and variations.

Authors:  King-Wai Yau; Roger C Hardie
Journal:  Cell       Date:  2009-10-16       Impact factor: 41.582

3.  Common mechanisms regulating dark noise and quantum bump amplification in Drosophila photoreceptors.

Authors:  Brian Chu; Che-Hsiung Liu; Sukanya Sengupta; Amit Gupta; Padinjat Raghu; Roger C Hardie
Journal:  J Neurophysiol       Date:  2013-01-30       Impact factor: 2.714

4.  Fractional Ca(2+) currents through TRP and TRPL channels in Drosophila photoreceptors.

Authors:  Brian Chu; Marten Postma; Roger C Hardie
Journal:  Biophys J       Date:  2013-05-07       Impact factor: 4.033

5.  Speed and sensitivity of phototransduction in Drosophila depend on degree of saturation of membrane phospholipids.

Authors:  Alex S Randall; Che-Hsiung Liu; Brian Chu; Qifeng Zhang; Sidharta A Dongre; Mikko Juusola; Kristian Franze; Michael J O Wakelam; Roger C Hardie
Journal:  J Neurosci       Date:  2015-02-11       Impact factor: 6.167

6.  Stochastic, adaptive sampling of information by microvilli in fly photoreceptors.

Authors:  Zhuoyi Song; Marten Postma; Stephen A Billings; Daniel Coca; Roger C Hardie; Mikko Juusola
Journal:  Curr Biol       Date:  2012-06-14       Impact factor: 10.834

7.  Epistasis in a model of molecular signal transduction.

Authors:  Alain Pumir; Boris Shraiman
Journal:  PLoS Comput Biol       Date:  2011-05-12       Impact factor: 4.475

8.  Drosophila photoreceptors and signaling mechanisms.

Authors:  Ben Katz; Baruch Minke
Journal:  Front Cell Neurosci       Date:  2009-06-11       Impact factor: 5.505

9.  Random Photon Absorption Model Elucidates How Early Gain Control in Fly Photoreceptors Arises from Quantal Sampling.

Authors:  Zhuoyi Song; Yu Zhou; Mikko Juusola
Journal:  Front Comput Neurosci       Date:  2016-06-24       Impact factor: 2.380

10.  Point process analysis of noise in early invertebrate vision.

Authors:  Kris V Parag; Glenn Vinnicombe
Journal:  PLoS Comput Biol       Date:  2017-10-27       Impact factor: 4.475

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