Literature DB >> 18652847

A new quantitative RT-PCR method for sensitive detection of dengue virus in serum samples.

Nadine Sadon1, Anne Delers, Richard G Jarman, Chonticha Klungthong, Ananda Nisalak, Robert V Gibbons, Ventzislav Vassilev.   

Abstract

In order to detect and identify dengue serotypes in serum samples, we developed a single-step quantitative reverse transcription-polymerase chain reaction (Q-RT-PCR) assay (referred to as Q-PCR). Sets of primers were selected from the capsid region of the viral genome. Dengue serotypes 1/3 and 2/4 were detected in two separate duplex amplification reactions using specific primers and fluorogenic TaqMan probes. Results obtained with this Q-PCR and the classical nested RT-PCR (N-PCR) assays were compared using a panel of 97 representative human sera collected from patients in Bangkok, Thailand. It is shown that the Q-PCR is a rapid, sensitive and reproducible tool for the detection and quantitation of the four dengue serotypes in clinical samples, and therefore of great interest for diagnostic use or for large cohort studies.

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Year:  2008        PMID: 18652847     DOI: 10.1016/j.jviromet.2008.06.023

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  26 in total

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Authors:  Veerachai Watanaveeradej; Sriluck Simasathien; Ananda Nisalak; Timothy P Endy; Richard G Jarman; Bruce L Innis; Stephen J Thomas; Robert V Gibbons; Sumetha Hengprasert; Rudiwilai Samakoses; Angkool Kerdpanich; David W Vaughn; J Robert Putnak; Kenneth H Eckels; Rafael De La Barrera; Mammen P Mammen
Journal:  Am J Trop Med Hyg       Date:  2011-08       Impact factor: 2.345

2.  Characteristics of mild dengue virus infection in Thai children.

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Journal:  Am J Trop Med Hyg       Date:  2013-10-14       Impact factor: 2.345

3.  Multicountry prospective clinical evaluation of two enzyme-linked immunosorbent assays and two rapid diagnostic tests for diagnosing dengue fever.

Authors:  Subhamoy Pal; Allison L Dauner; Andrea Valks; Brett M Forshey; Kanya C Long; Butsaya Thaisomboonsuk; Gloria Sierra; Victor Picos; Sara Talmage; Amy C Morrison; Eric S Halsey; Guillermo Comach; Chadwick Yasuda; Michael Loeffelholz; Richard G Jarman; Stefan Fernandez; Ung Sam An; Tadeusz J Kochel; Louis E Jasper; Shuenn-Jue L Wu
Journal:  J Clin Microbiol       Date:  2015-01-14       Impact factor: 5.948

4.  Validation of an internally controlled one-step real-time multiplex RT-PCR assay for the detection and quantitation of dengue virus RNA in plasma.

Authors:  Kien Duong Thi Hue; Trung Vu Tuan; Hanh Tien Nguyen Thi; Chau Tran Nguyen Bich; Huy Huynh Le Anh; Bridget A Wills; Cameron P Simmons
Journal:  J Virol Methods       Date:  2011-08-05       Impact factor: 2.014

5.  Delivery of antiviral small interfering RNA with gold nanoparticles inhibits dengue virus infection in vitro.

Authors:  Amber M Paul; Yongliang Shi; Dhiraj Acharya; Jessica R Douglas; Amanda Cooley; John F Anderson; Faqing Huang; Fengwei Bai
Journal:  J Gen Virol       Date:  2014-05-14       Impact factor: 3.891

6.  Evaluation of ViroCyt® Virus Counter for rapid filovirus quantitation.

Authors:  Cynthia A Rossi; Brian J Kearney; Scott P Olschner; Priscilla L Williams; Camenzind G Robinson; Megan L Heinrich; Ashley M Zovanyi; Michael F Ingram; David A Norwood; Randal J Schoepp
Journal:  Viruses       Date:  2015-02-20       Impact factor: 5.048

7.  An adjuvanted, tetravalent dengue virus purified inactivated vaccine candidate induces long-lasting and protective antibody responses against dengue challenge in rhesus macaques.

Authors:  Stefan Fernandez; Stephen J Thomas; Rafael De La Barrera; Rawiwan Im-Erbsin; Richard G Jarman; Benoît Baras; Jean-François Toussaint; Sally Mossman; Bruce L Innis; Alexander Schmidt; Marie-Pierre Malice; Pascale Festraets; Lucile Warter; J Robert Putnak; Kenneth H Eckels
Journal:  Am J Trop Med Hyg       Date:  2015-02-02       Impact factor: 2.345

8.  A prospective nested case-control study of Dengue in infants: rethinking and refining the antibody-dependent enhancement dengue hemorrhagic fever model.

Authors:  Daniel H Libraty; Luz P Acosta; Veronica Tallo; Edelwisa Segubre-Mercado; Analisa Bautista; James A Potts; Richard G Jarman; In-Kyu Yoon; Robert V Gibbons; Job D Brion; Rosario Z Capeding
Journal:  PLoS Med       Date:  2009-10-27       Impact factor: 11.069

9.  A phase II, randomized, safety and immunogenicity study of a re-derived, live-attenuated dengue virus vaccine in healthy adults.

Authors:  Stephen J Thomas; Kenneth H Eckels; Isabelle Carletti; Rafael De La Barrera; Francis Dessy; Stefan Fernandez; Robert Putnak; Jean-Francois Toussaint; Wellington Sun; Kristen Bauer; Robert V Gibbons; Bruce L Innis
Journal:  Am J Trop Med Hyg       Date:  2012-12-03       Impact factor: 2.345

10.  Development of real time PCR for detection and quantitation of Dengue Viruses.

Authors:  K R Gurukumar; D Priyadarshini; J A Patil; A Bhagat; A Singh; P S Shah; D Cecilia
Journal:  Virol J       Date:  2009-01-23       Impact factor: 4.099

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