Literature DB >> 18650357

Impact of diversity of colonizing strains on strategies for sampling Escherichia coli from fecal specimens.

Ebbing Lautenbach1, Warren B Bilker, Pam Tolomeo, Joel N Maslow.   

Abstract

Of 49 subjects, 21 were colonized with more than one strain of Escherichia coli and 12 subjects had at least one strain present in fewer than 20% of colonies. The ability to accurately characterize E. coli strain diversity is directly related to the number of colonies sampled and the underlying prevalence of the strain.

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Year:  2008        PMID： 18650357      PMCID： PMC2546773          DOI： 10.1128/JCM.00945-08

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  11 in total

1.  Diversity, frequency, and persistence of Escherichia coli O157 strains from range cattle environments.

Authors:  David G Renter; Jan M Sargeant; Richard D Oberst; Mansour Samadpour
Journal:  Appl Environ Microbiol       Date:  2003-01       Impact factor: 4.792

Review 2.  The role of the intestinal tract as a reservoir and source for transmission of nosocomial pathogens.

Authors:  Curtis J Donskey
Journal:  Clin Infect Dis       Date:  2004-06-25       Impact factor: 9.079

3.  Detection of genetic diversity by pulsed-field gel electrophoresis among Escherichia coli O157 isolated from bovine faecal samples by immunomagnetic separation technique.

Authors:  L Vali; A Hamouda; M C Pearce; H I Knight; J Evans; S G B Amyes
Journal:  Lett Appl Microbiol       Date:  2007-01       Impact factor: 2.858

Review 4.  Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing.

Authors:  F C Tenover; R D Arbeit; R V Goering; P A Mickelsen; B E Murray; D H Persing; B Swaminathan
Journal:  J Clin Microbiol       Date:  1995-09       Impact factor: 5.948

5.  Diversity and distribution of Escherichia coli genotypes and antibiotic resistance phenotypes in feces of humans, cattle, and horses.

Authors:  Matthew A Anderson; John E Whitlock; Valerie J Harwood
Journal:  Appl Environ Microbiol       Date:  2006-09-01       Impact factor: 4.792

6.  Changes of viability and composition of the Escherichia coli flora in faecal samples during long time storage.

Authors:  S J Achá; I Kühn; G Mbazima; Patricia Colque-Navarro; R Möllby
Journal:  J Microbiol Methods       Date:  2005-06-24       Impact factor: 2.363

7.  Clonal diversity of Escherichia coli colonizing stools and urinary tracts of young girls.

Authors:  Theresa A Schlager; J Owen Hendley; Alison L Bell; Thomas S Whittam
Journal:  Infect Immun       Date:  2002-03       Impact factor: 3.441

8.  Colonization with extraintestinal pathogenic Escherichia coli among nursing home residents and its relationship to fluoroquinolone resistance.

Authors:  Joel N Maslow; Ebbing Lautenbach; Thomas Glaze; Warren Bilker; James R Johnson
Journal:  Antimicrob Agents Chemother       Date:  2004-09       Impact factor: 5.191

9.  The homogeneity of the faecal coliform flora of normal school-girls, characterized by serological and biochemical properties.

Authors:  G Lidin-Janson; B Kaijser; K Lincoln; S Olling; H Wedel
Journal:  Med Microbiol Immunol       Date:  1978       Impact factor: 3.402

10.  Evaluation of colony-based examinations of diarrheagenic Escherichia coli in stool specimens: low probability of detection because of low concentrations, particularly during the early stage of gastroenteritis.

Authors:  Yoshio Iijima; Shinobu Tanaka; Kanji Miki; Shizuko Kanamori; Masahiro Toyokawa; Seishi Asari
Journal:  Diagn Microbiol Infect Dis       Date:  2007-04-20       Impact factor: 2.803
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  22 in total

1.  Colonization with Escherichia coli Strains among Female Sex Partners of Men with Febrile Urinary Tract Infection.

Authors:  Peter Ulleryd; Torsten Sandberg; Flemming Scheutz; Connie Clabots; Brian D Johnston; Paul Thuras; James R Johnson
Journal:  J Clin Microbiol       Date:  2015-04-01       Impact factor: 5.948

2.  Strain diversity of CTX-M-producing Enterobacteriaceae in individual pigs: insights into the dynamics of shedding during the production cycle.

Authors:  Katrine Hartung Hansen; Valeria Bortolaia; Peter Damborg; Luca Guardabassi
Journal:  Appl Environ Microbiol       Date:  2014-08-15       Impact factor: 4.792

3.  The prevalence of fluoroquinolone resistance mechanisms in colonizing Escherichia coli isolates recovered from hospitalized patients.

Authors:  Ebbing Lautenbach; Joshua P Metlay; Xiangqun Mao; Xiaoyan Han; Neil O Fishman; Warren B Bilker; Pam Tolomeo; Mary Wheeler; Irving Nachamkin
Journal:  Clin Infect Dis       Date:  2010-08-01       Impact factor: 9.079

4.  Whole-genome comparison of urinary pathogenic Escherichia coli and faecal isolates of UTI patients and healthy controls.

Authors:  Karen Leth Nielsen; Marc Stegger; Kristoffer Kiil; Paul A Godfrey; Michael Feldgarden; Berit Lilje; Paal S Andersen; Niels Frimodt-Møller
Journal:  Int J Med Microbiol       Date:  2017-09-14       Impact factor: 3.473

5.  Day-to-Day Dynamics of Commensal Escherichia coli in Zimbabwean Cows Evidence Temporal Fluctuations within a Host-Specific Population Structure.

Authors:  Méril Massot; Camille Couffignal; Olivier Clermont; Camille D'Humières; Jérémie Chatel; Nicolas Plault; Antoine Andremont; Alexandre Caron; France Mentré; Erick Denamur
Journal:  Appl Environ Microbiol       Date:  2017-06-16       Impact factor: 4.792

6.  Risk factors for fecal colonization with multiple distinct strains of Escherichia coli among long-term care facility residents.

Authors:  Ebbing Lautenbach; Pam Tolomeo; Nicole Black; Joel N Maslow
Journal:  Infect Control Hosp Epidemiol       Date:  2009-05       Impact factor: 3.254

7.  Real-time PCR for quantitative analysis of human commensal Escherichia coli populations reveals a high frequency of subdominant phylogroups.

Authors:  Mounira Smati; Olivier Clermont; Frédéric Le Gal; Olivier Schichmanoff; Françoise Jauréguy; Alain Eddi; Erick Denamur; Bertrand Picard
Journal:  Appl Environ Microbiol       Date:  2013-06-14       Impact factor: 4.792

8.  Antimicrobial resistance in gram-negative pathogens: crafting the tools necessary to navigate the long ascent out of the abyss.

Authors:  Ebbing Lautenbach
Journal:  J Infect Dis       Date:  2009-09-15       Impact factor: 5.226

9.  Metagenomic Signatures of Gut Infections Caused by Different Escherichia coli Pathotypes.

Authors:  Angela Peña-Gonzalez; Maria J Soto-Girón; Shanon Smith; Jeticia Sistrunk; Lorena Montero; Maritza Páez; Estefanía Ortega; Janet K Hatt; William Cevallos; Gabriel Trueba; Karen Levy; Konstantinos T Konstantinidis
Journal:  Appl Environ Microbiol       Date:  2019-11-27       Impact factor: 4.792

10.  Antimicrobial Resistance in Commensal Escherichia coli Isolated from Pigs and Pork Derived from Farms Either Routinely Using or Not Using In-Feed Antimicrobials.

Authors:  Kittitat Lugsomya; Jitrapa Yindee; Waree Niyomtham; Chanwit Tribuddharat; Padet Tummaruk; David J Hampson; Nuvee Prapasarakul
Journal:  Microb Drug Resist       Date:  2018-09       Impact factor: 3.431
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