Literature DB >> 18650347

Phylogenetic analysis of viridans group streptococci causing endocarditis.

Keith E Simmon1, Lori Hall, Christopher W Woods, Francesc Marco, Jose M Miro, Christopher Cabell, Bruno Hoen, Mercedes Marin, Riccardo Utili, Efthymia Giannitsioti, Thanh Doco-Lecompte, Suzanne Bradley, Stanley Mirrett, Arjana Tambic, Suzanne Ryan, David Gordon, Phillip Jones, Tony Korman, Dannah Wray, L Barth Reller, Marie-Francoise Tripodi, Patrick Plesiat, Arthur J Morris, Selwyn Lang, David R Murdoch, Cathy A Petti.   

Abstract

Identification of viridans group streptococci (VGS) to the species level is difficult because VGS exchange genetic material. We performed multilocus DNA target sequencing to assess phylogenetic concordance of VGS for a well-defined clinical syndrome. The hierarchy of sequence data was often discordant, underscoring the importance of establishing biological relevance for finer phylogenetic distinctions.

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Mesh：

Year:  2008        PMID： 18650347      PMCID： PMC2546745          DOI： 10.1128/JCM.00920-08

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  15 in total

1.  Proposed modifications to the Duke criteria for the diagnosis of infective endocarditis.

Authors:  J S Li; D J Sexton; N Mick; R Nettles; V G Fowler; T Ryan; T Bashore; G R Corey
Journal:  Clin Infect Dis       Date:  2000-04-03       Impact factor: 9.079

2.  Identification of clinically relevant viridans group streptococci by sequence analysis of the 16S-23S ribosomal DNA spacer region.

Authors:  Chao Chien Chen; Lee Jene Teng; Tsung Chain Chang
Journal:  J Clin Microbiol       Date:  2004-06       Impact factor: 5.948

3.  MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment.

Authors:  Sudhir Kumar; Koichiro Tamura; Masatoshi Nei
Journal:  Brief Bioinform       Date:  2004-06       Impact factor: 11.622

4.  Use of tuf sequences for genus-specific PCR detection and phylogenetic analysis of 28 streptococcal species.

Authors:  François J Picard; Danbing Ke; Dominique K Boudreau; Maurice Boissinot; Ann Huletsky; Dave Richard; Marc Ouellette; Paul H Roy; Michel G Bergeron
Journal:  J Clin Microbiol       Date:  2004-08       Impact factor: 5.948

5.  Antimicrobial susceptibility patterns among viridans group streptococcal isolates from infective endocarditis patients from 1971 to 1986 and 1994 to 2002.

Authors:  Rajesh M Prabhu; Kerryl E Piper; Larry M Baddour; James M Steckelberg; Walter R Wilson; Robin Patel
Journal:  Antimicrob Agents Chemother       Date:  2004-11       Impact factor: 5.191

6.  Application of SmartGene IDNS software to partial 16S rRNA gene sequences for a diverse group of bacteria in a clinical laboratory.

Authors:  Keith E Simmon; Ann C Croft; Cathy A Petti
Journal:  J Clin Microbiol       Date:  2006-10-18       Impact factor: 5.948

7.  Identification of species of Abiotrophia, Enterococcus, Granulicatella and Streptococcus by sequence analysis of the ribosomal 16S-23S intergenic spacer region.

Authors:  Sheng Kai Tung; Lee Jene Teng; Mario Vaneechoutte; Hung Mo Chen; Tsung Chain Chang
Journal:  J Med Microbiol       Date:  2007-04       Impact factor: 2.472

8.  Bacteremia with Streptococcus bovis and Streptococcus salivarius: clinical correlates of more accurate identification of isolates.

Authors:  K L Ruoff; S I Miller; C V Garner; M J Ferraro; S B Calderwood
Journal:  J Clin Microbiol       Date:  1989-02       Impact factor: 5.948

9.  Genetic relationships between clinical isolates of Streptococcus pneumoniae, Streptococcus oralis, and Streptococcus mitis: characterization of "Atypical" pneumococci and organisms allied to S. mitis harboring S. pneumoniae virulence factor-encoding genes.

Authors:  A M Whatmore; A Efstratiou; A P Pickerill; K Broughton; G Woodard; D Sturgeon; R George; C G Dowson
Journal:  Infect Immun       Date:  2000-03       Impact factor: 3.441

10.  rpoB gene sequence-based identification of aerobic Gram-positive cocci of the genera Streptococcus, Enterococcus, Gemella, Abiotrophia, and Granulicatella.

Authors:  Michel Drancourt; Véronique Roux; Pierre-Edouard Fournier; Didier Raoult
Journal:  J Clin Microbiol       Date:  2004-02       Impact factor: 5.948
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  16 in total

1.  Wound botulism complicating internal fixation of a complex radial fracture.

Authors:  Steve M Taylor; Cameron R Wolfe; Terry C Dixon; David S Ruch; Gary M Cox
Journal:  J Clin Microbiol       Date:  2009-12-09       Impact factor: 5.948

Review 2.  Infective endocarditis.

Authors:  Thomas L Holland; Larry M Baddour; Arnold S Bayer; Bruno Hoen; Jose M Miro; Vance G Fowler
Journal:  Nat Rev Dis Primers       Date:  2016-09-01       Impact factor: 52.329

3.  Oral streptococcal bacteremia in hospitalized patients: taxonomic identification and clinical characterization.

Authors:  Todd Kitten; Cindy L Munro; Nicai Q Zollar; Sehmi P Lee; Resham D Patel
Journal:  J Clin Microbiol       Date:  2011-12-21       Impact factor: 5.948

4.  Clinical presentation of infective endocarditis caused by different groups of non-beta haemolytic streptococci.

Authors:  B Nilson; L Olaison; M Rasmussen
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2015-11-26       Impact factor: 3.267

5.  Denaturing gradient gel electrophoresis of PCR-amplified gki genes: a new technique for tracking streptococci.

Authors:  M J van Vliet; W J E Tissing; E S J M de Bont; N E L Meessen; W A Kamps; H J M Harmsen
Journal:  J Clin Microbiol       Date:  2009-05-20       Impact factor: 5.948

Review 6.  Collagen-binding proteins of Streptococcus mutans and related streptococci.

Authors:  A Avilés-Reyes; J H Miller; J A Lemos; J Abranches
Journal:  Mol Oral Microbiol       Date:  2016-04-25       Impact factor: 3.563

7.  Isolation and identification of Kroppenstedtia eburnea isolates from multiple patient samples.

Authors:  Adam P Barker; Keith E Simmon; Sam Cohen; E Susan Slechta; Mark A Fisher; Robert Schlaberg
Journal:  J Clin Microbiol       Date:  2012-08-01       Impact factor: 5.948

8.  Susceptibility profiles of Nocardia isolates based on current taxonomy.

Authors:  Robert Schlaberg; Mark A Fisher; Kimberley E Hanson
Journal:  Antimicrob Agents Chemother       Date:  2013-11-18       Impact factor: 5.191

9.  Identification of clinically relevant nonhemolytic Streptococci on the basis of sequence analysis of 16S-23S intergenic spacer region and partial gdh gene.

Authors:  Xiaohui Chen Nielsen; Ulrik Stenz Justesen; Rimtas Dargis; Michael Kemp; Jens Jørgen Christensen
Journal:  J Clin Microbiol       Date:  2009-02-04       Impact factor: 5.948

10.  Infective Endocarditis: Identification of Catalase-Negative, Gram-Positive Cocci from Blood Cultures by Partial 16S rRNA Gene Analysis and by Vitek 2 Examination.

Authors:  Rawaa Jalil Abdul-Redha; Michael Kemp; Jette M Bangsborg; Magnus Arpi; Jens Jørgen Christensen
Journal:  Open Microbiol J       Date:  2010-12-31
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