Literature DB >> 18647346

Crystal structures of Drosophila mutant translin and characterization of translin variants reveal the structural plasticity of translin proteins.

Gagan D Gupta1, Ravindra D Makde, Basuthkar J Rao, Vinay Kumar.   

Abstract

Translin protein is highly conserved in eukaryotes. Human translin binds both ssDNA and RNA. Its nucleic acid binding site results from a combination of basic regions in the octameric structure. We report here the first biochemical characterization of wild-type Drosophila melanogaster (drosophila) translin and a chimeric translin, and present 3.5 A resolution crystal structures of drosophila P168S mutant translin from two crystal forms. The wild-type drosophila translin most likely exists as an octamer/decamer, and binds to the ssDNA Bcl-CL1 sequence. In contrast, ssDNA binding-incompetent drosophila P168S mutant translin exists as a tetramer. The structures of the mutant translin are identical in both crystal forms, and their C-terminal residues are disordered. The chimeric protein, possessing two nucleic acid binding motifs of drosophila translin, the C-terminal residues of human translin, and serine at position 168, attains the octameric state and binds to ssDNA. The present studies suggest that the oligomeric status of translin critically influences the DNA binding properties of translin proteins.

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Year:  2008        PMID: 18647346     DOI: 10.1111/j.1742-4658.2008.06571.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  9 in total

1.  Characterization of a plant (rice) translin and its comparative analysis with human translin.

Authors:  Rajani Kant Chittela; Gagan Deep Gupta; Anand Ballal
Journal:  Planta       Date:  2014-05-27       Impact factor: 4.116

2.  The BTB/POZ domain of the Arabidopsis disease resistance protein NPR1 interacts with the repression domain of TGA2 to negate its function.

Authors:  Patrick Boyle; Errol Le Su; Amanda Rochon; Heather L Shearer; Jhadeswar Murmu; Jee Yan Chu; Pierre R Fobert; Charles Després
Journal:  Plant Cell       Date:  2009-11-13       Impact factor: 11.277

Review 3.  Translin: A multifunctional protein involved in nucleic acid metabolism.

Authors:  Alka Gupta; Vinayaki S Pillai; Rajani Kant Chittela
Journal:  J Biosci       Date:  2019-12       Impact factor: 1.826

4.  Molecular evolution of translin superfamily proteins within the genomes of eubacteria, archaea and eukaryotes.

Authors:  Gagan D Gupta; Avinash Kale; Vinay Kumar
Journal:  J Mol Evol       Date:  2012-11-28       Impact factor: 2.395

5.  Low-resolution structure of Drosophila translin.

Authors:  Vinay Kumar; Gagan D Gupta
Journal:  FEBS Open Bio       Date:  2012-03-15       Impact factor: 2.693

6.  Multimeric assembly and biochemical characterization of the Trax-translin endonuclease complex.

Authors:  Yuan Tian; Dhirendra K Simanshu; Manuel Ascano; Ruben Diaz-Avalos; Ah Young Park; Stefan A Juranek; William J Rice; Qian Yin; Carol V Robinson; Thomas Tuschl; Dinshaw J Patel
Journal:  Nat Struct Mol Biol       Date:  2011-05-08       Impact factor: 15.369

7.  Search for limiting factors in the RNAi pathway in silkmoth tissues and the Bm5 cell line: the RNA-binding proteins R2D2 and Translin.

Authors:  Luc Swevers; Jisheng Liu; Hanneke Huvenne; Guy Smagghe
Journal:  PLoS One       Date:  2011-05-26       Impact factor: 3.240

8.  Structure of C3PO and mechanism of human RISC activation.

Authors:  Xuecheng Ye; Nian Huang; Ying Liu; Zain Paroo; Carlos Huerta; Peng Li; She Chen; Qinghua Liu; Hong Zhang
Journal:  Nat Struct Mol Biol       Date:  2011-05-08       Impact factor: 15.369

9.  Identification of nucleic acid binding sites on translin-associated factor X (TRAX) protein.

Authors:  Gagan Deep Gupta; Vinay Kumar
Journal:  PLoS One       Date:  2012-03-12       Impact factor: 3.240

  9 in total

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