Literature DB >> 18641617

Cutting the forest to see a single tree?

Antoine M van Oijen1.   

Abstract

The development of single-molecule tools has significantly impacted the way we think about biochemical processes. Watching a single protein in action allows us to observe kinetic details and rare subpopulations that are hidden in ensemble-averaging techniques. I will discuss here the pros and cons of the single-molecule approach in studying ligand binding in macromolecular systems and how these techniques can be applied to characterize the behavior of large multicomponent biochemical systems.

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Year:  2008        PMID: 18641617     DOI: 10.1038/nchembio0808-440

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  7 in total

Review 1.  Single-molecule studies of DNA replisome function.

Authors:  Senthil K Perumal; Hongjun Yue; Zhenxin Hu; Michelle M Spiering; Stephen J Benkovic
Journal:  Biochim Biophys Acta       Date:  2009-08-07

2.  Investigation of stoichiometry of T4 bacteriophage helicase loader protein (gp59).

Authors:  Sri Ranjini Arumugam; Tae-Hee Lee; Stephen J Benkovic
Journal:  J Biol Chem       Date:  2009-08-20       Impact factor: 5.157

3.  Experimental and computational analysis of DNA unwinding and polymerization kinetics.

Authors:  Manjula Pandey; Mikhail K Levin; Smita S Patel
Journal:  Methods Mol Biol       Date:  2010

4.  Lipid-based passivation in nanofluidics.

Authors:  Fredrik Persson; Joachim Fritzsche; Kalim U Mir; Mauro Modesti; Fredrik Westerlund; Jonas O Tegenfeldt
Journal:  Nano Lett       Date:  2012-04-06       Impact factor: 11.189

5.  The Design of Simple Bacterial Microarrays: Development towards Immobilizing Single Living Bacteria on Predefined Micro-Sized Spots on Patterned Surfaces.

Authors:  Nina Bjørk Arnfinnsdottir; Vegar Ottesen; Rahmi Lale; Marit Sletmoen
Journal:  PLoS One       Date:  2015-06-03       Impact factor: 3.240

Review 6.  Bringing single-molecule spectroscopy to macromolecular protein complexes.

Authors:  Chirlmin Joo; Mohamed Fareh; V Narry Kim
Journal:  Trends Biochem Sci       Date:  2012-11-28       Impact factor: 13.807

7.  Heterogeneous staining: a tool for studies of how fluorescent dyes affect the physical properties of DNA.

Authors:  Lena Nyberg; Fredrik Persson; Björn Akerman; Fredrik Westerlund
Journal:  Nucleic Acids Res       Date:  2013-08-23       Impact factor: 16.971

  7 in total

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