Literature DB >> 18640639

The EDTA-treated expanded satellite tobacco necrosis virus: biochemical properties and crystallization.

T Unge1, I Montelius, L Liljas, L G Ofverstedt.   

Abstract

The calcium ions normally present in the protein shell of the satellite tobacco necrosis virus (STNV) have been removed by EDTA. The radius of the EDTA-treated virion was found to be dependent upon pH. The radial increase was 2% at pH 5.0,4.5% at pH 6.5, and 7% at pH 7.0 as determined by analytical ultracentrifugation and X-ray crystallography. The virion could be recontracted by lowering the pH or by the addition of divalent cations, calcium ions being the most efficient. At pH 7.0 and above, the EDTA-treated virion was sensitive to ribonucleases and to trypsin. The cleavage site for trypsin is at Arg 28, which is near the N terminus of the shell domain of the subunit, but at a point which is well buried in the native structure. Crystals of the expanded STNV particles at pH 5.0 and 6.5 have been produced.

Entities:  

Year:  1986        PMID: 18640639     DOI: 10.1016/0042-6822(86)90385-5

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  5 in total

1.  Molecular cloning and sequencing of the coat protein gene of a Nebraskan isolate of tobacco necrosis virus: the deduced coat protein sequence has only moderate homology with those of strain A and strain D.

Authors:  L Zhang; R French; W G Langenberg
Journal:  Arch Virol       Date:  1993       Impact factor: 2.574

2.  Exploring the role of genome and structural ions in preventing viral capsid collapse during dehydration.

Authors:  Natalia Martín-González; Sofía M Guérin Darvas; Aritz Durana; Gerardo A Marti; Diego M A Guérin; Pedro J de Pablo
Journal:  J Phys Condens Matter       Date:  2018-03-14       Impact factor: 2.333

3.  Molecular dynamics simulation in virus research.

Authors:  Hirotaka Ode; Masaaki Nakashima; Shingo Kitamura; Wataru Sugiura; Hironori Sato
Journal:  Front Microbiol       Date:  2012-07-19       Impact factor: 5.640

4.  Sequence-specific, RNA-protein interactions overcome electrostatic barriers preventing assembly of satellite tobacco necrosis virus coat protein.

Authors:  Robert J Ford; Amy M Barker; Saskia E Bakker; Robert H Coutts; Neil A Ranson; Simon E V Phillips; Arwen R Pearson; Peter G Stockley
Journal:  J Mol Biol       Date:  2013-01-11       Impact factor: 5.469

5.  Virus capsid dissolution studied by microsecond molecular dynamics simulations.

Authors:  Daniel S D Larsson; Lars Liljas; David van der Spoel
Journal:  PLoS Comput Biol       Date:  2012-05-10       Impact factor: 4.475

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.