Literature DB >> 18639939

Simultaneously subtyping of all influenza A viruses using DNA microarrays.

Xueqing Han1, Xiangmei Lin, Bohua Liu, Yihong Hou, Jinhai Huang, Shaoqiang Wu, Jian Liu, Lin Mei, Guangle Jia, Qingyu Zhu.   

Abstract

Rapid diagnosis of novel emerging subtypes of influenza viruses is vital for effective global influenza surveillance. To this end, a novel microarray based surveillance was developed for subtyping all influenza A viruses on one chip. Using reference strains of different influenza subtypes and samples from different areas, the results show that all the subtypes of the influenza A virus could be identified simultaneously on this microchip with high sensitivity. There was no cross-hybridization reaction with other viruses, indicating that the microarray is specific for influenza A viruses. Such a diagnostic microarray will undoubtedly be useful for identifying novel influenza A virus subtypes.

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Year:  2008        PMID: 18639939     DOI: 10.1016/j.jviromet.2008.05.027

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  8 in total

1.  Development and clinical testing of a simple, low-density gel element array for influenza identification, subtyping, and H275Y detection.

Authors:  Darrell P Chandler; Sara B Griesemer; Christopher Knickerbocker; Julia B Golova; Amine Lambarqui; Alexander N Perov; Cynthia Zimmerman; Cory Wiles; George B Rudy; Kirsten St George
Journal:  J Virol Methods       Date:  2014-07-24       Impact factor: 2.014

2.  Rapid, simple influenza RNA extraction from nasopharyngeal samples.

Authors:  Darrell P Chandler; Sara B Griesemer; Christopher G Cooney; Rebecca Holmberg; Nitu Thakore; Becca Mokhiber; Phillip Belgrader; Christopher Knickerbocker; Jeanmarie Schied; Kirsten St George
Journal:  J Virol Methods       Date:  2012-03-07       Impact factor: 2.014

3.  Variation-tolerant capture and multiplex detection of nucleic acids: application to detection of microbes.

Authors:  Christina Ohrmalm; Ronnie Eriksson; Magnus Jobs; Magnus Simonson; Maria Strømme; Kåre Bondeson; Björn Herrmann; Asa Melhus; Jonas Blomberg
Journal:  J Clin Microbiol       Date:  2012-07-18       Impact factor: 5.948

4.  Use of consensus sequences for the design of high density resequencing microarrays: the influenza virus paradigm.

Authors:  India Leclercq; Nicolas Berthet; Christophe Batéjat; Claudine Rousseaux; Philip Dickinson; Iain G Old; Katherine Kong; Giulia C Kennedy; Stewart T Cole; Jean-Claude Manuguerra
Journal:  BMC Genomics       Date:  2010-10-20       Impact factor: 3.969

5.  Universal oligonucleotide microarray for sub-typing of Influenza A virus.

Authors:  Vladimir A Ryabinin; Elena V Kostina; Galiya A Maksakova; Alexander A Neverov; Konstantin M Chumakov; Alexander N Sinyakov
Journal:  PLoS One       Date:  2011-04-29       Impact factor: 3.240

6.  Comparative evaluation of effectiveness of IAVchip DNA microarray in influenza A diagnosis.

Authors:  K T Sultankulova; O V Chervyakova; N S Kozhabergenov; K A Shorayeva; V M Strochkov; M B Orynbayev; N T Sandybayev; A R Sansyzbay; A V Vasin
Journal:  ScientificWorldJournal       Date:  2014-11-23

7.  Genotyping and detection of common avian and human origin-influenza viruses using a portable chemiluminescence imaging microarray.

Authors:  Yingjie Zhang; Qiqi Liu; Dou Wang; Suhong Chen; Xiaobo Wang; Shengqi Wang
Journal:  Springerplus       Date:  2016-10-25

Review 8.  Diagnostic and Vaccination Approaches for Newcastle Disease Virus in Poultry: The Current and Emerging Perspectives.

Authors:  Muhammad Bashir Bello; Khatijah Yusoff; Aini Ideris; Mohd Hair-Bejo; Ben P H Peeters; Abdul Rahman Omar
Journal:  Biomed Res Int       Date:  2018-08-05       Impact factor: 3.411

  8 in total

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