Literature DB >> 18630754

Regulation of flowering time by RNA processing.

L C Terzi1, G G Simpson.   

Abstract

Plants control the time at which they flower by integrating environmental cues such as day length and temperature with an endogenous program of development. Flowering time is a quantitative trait and a model for how precision in gene regulation is delivered. In this review, we reveal that flowering time control is particularly rich in RNA processing-based gene regulatory phenomena. We review those factors which function in conserved RNA processing events like alternative 3' end formation, splicing, RNA export and miRNA biogenesis and how they affect flowering time. Likewise, we review the novel plant-specific RNA-binding proteins identified as regulators of flowering time control. In addition, we add to the network of flowering time control pathways, information on alternative processing of flowering time gene pre-mRNAs. Finally, we describe new approaches to dissect the mechanisms which underpin this control.

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Year:  2008        PMID: 18630754     DOI: 10.1007/978-3-540-76776-3_11

Source DB:  PubMed          Journal:  Curr Top Microbiol Immunol        ISSN: 0070-217X            Impact factor:   4.291


  15 in total

1.  Genome-wide computational function prediction of Arabidopsis proteins by integration of multiple data sources.

Authors:  Yiannis A I Kourmpetis; Aalt D J van Dijk; Roeland C H J van Ham; Cajo J F ter Braak
Journal:  Plant Physiol       Date:  2010-11-22       Impact factor: 8.340

2.  High throughput characterizations of poly(A) site choice in plants.

Authors:  Liuyin Ma; Pratap Kumar Pati; Man Liu; Qingshun Q Li; Arthur G Hunt
Journal:  Methods       Date:  2013-07-11       Impact factor: 3.608

3.  Arabidopsis floral initiator SKB1 confers high salt tolerance by regulating transcription and pre-mRNA splicing through altering histone H4R3 and small nuclear ribonucleoprotein LSM4 methylation.

Authors:  Zhaoliang Zhang; Shupei Zhang; Ya Zhang; Xin Wang; Dan Li; Qiuling Li; Minghui Yue; Qun Li; Yu-e Zhang; Yunyuan Xu; Yongbiao Xue; Kang Chong; Shilai Bao
Journal:  Plant Cell       Date:  2011-01-21       Impact factor: 11.277

4.  Arginine methylation mediated by the Arabidopsis homolog of PRMT5 is essential for proper pre-mRNA splicing.

Authors:  Xian Deng; Lianfeng Gu; Chunyan Liu; Tiancong Lu; Falong Lu; Zhike Lu; Peng Cui; Yanxi Pei; Baichen Wang; Songnian Hu; Xiaofeng Cao
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-18       Impact factor: 11.205

5.  Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses.

Authors:  Neeti Sanan-Mishra; Vikash Kumar; Sudhir K Sopory; Sunil K Mukherjee
Journal:  Mol Genet Genomics       Date:  2009-11       Impact factor: 3.291

6.  Polypyrimidine tract binding protein homologs from Arabidopsis are key regulators of alternative splicing with implications in fundamental developmental processes.

Authors:  Christina Rühl; Eva Stauffer; André Kahles; Gabriele Wagner; Gabriele Drechsel; Gunnar Rätsch; Andreas Wachter
Journal:  Plant Cell       Date:  2012-11-27       Impact factor: 11.277

7.  Transgene regulation in plants by alternative splicing of a suicide exon.

Authors:  Scott F Hickey; Malathy Sridhar; Alexander J Westermann; Qian Qin; Pooja Vijayendra; Geoffrey Liou; Ming C Hammond
Journal:  Nucleic Acids Res       Date:  2012-02-06       Impact factor: 16.971

8.  Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis.

Authors:  Yamile Marquez; John W S Brown; Craig Simpson; Andrea Barta; Maria Kalyna
Journal:  Genome Res       Date:  2012-03-05       Impact factor: 9.043

9.  Identification of genomic regions determining the phenological development leading to floral transition in wheat (Triticum aestivum L.).

Authors:  Monica Båga; D Brian Fowler; Ravindra N Chibbar
Journal:  J Exp Bot       Date:  2009-06-24       Impact factor: 6.992

Review 10.  Regulation of reproductive development by non-coding RNA in Arabidopsis: to flower or not to flower.

Authors:  Ayako Yamaguchi; Mitsutomo Abe
Journal:  J Plant Res       Date:  2012-07-27       Impact factor: 2.629

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