Literature DB >> 18628940

Many Genbank entries for complete microbial genomes violate the Genbank standard.

P D Karp1.   

Abstract

A survey of Genbank entries for complete microbial genomes reveals that the majority do not conform to the Genbank standard. Typical deviations from the Genbank standard include records with information in incorrect fields, addition of extraneous and confusing information within a field, and omission of useful fields. This situation results from two principal causes: genome centres do not submit Genbank records in the proper form and the Genbank, EMBL and DDBJ staffs do not enforce the database standards that they have defined.

Year:  2001        PMID: 18628940      PMCID: PMC2447183          DOI: 10.1002/cfg.63

Source DB:  PubMed          Journal:  Comp Funct Genomics        ISSN: 1531-6912


  2 in total

1.  C(2)M: configurable chemical middleware.

Authors:  P van der Vet; H E Roosendaal; P A Geurts
Journal:  Comp Funct Genomics       Date:  2001

2.  Standards and ontologies for functional genomics: towards unified ontologies for biology and biomedicine.

Authors:  Midori A Harris; Helen Parkinson
Journal:  Comp Funct Genomics       Date:  2003
  2 in total

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