Literature DB >> 18628853

Upstream - news in genomics.

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Abstract

In recent months a bumper crop of genomes has been completed, including the fission yeast (Schizosaccharomyces pombe) and rice (Oryza sativa). Two large-scale studies of Saccharomyces cerevisiae protein complexes provided a picture of the eukaryotic proteome as a network of complexes. Amongst the other stories of interest was a demonstration that proteomic analysis of blood samples can be used to detect ovarian cancer, perhaps even as early as stage I.

Entities:  

Year:  2002        PMID： 18628853      PMCID： PMC2447274          DOI： 10.1002/cfg.172

Source DB:  PubMed          Journal:  Comp Funct Genomics        ISSN： 1531-6912


  22 in total

1.  Genetic analysis of the mouse brain proteome.

Authors:  Joachim Klose; Christina Nock; Marion Herrmann; Kai Stühler; Katrin Marcus; Martin Blüggel; Eberhard Krause; Leonard C Schalkwyk; Sohaila Rastan; Steve D M Brown; Konrad Büssow; Heinz Himmelbauer; Hans Lehrach
Journal:  Nat Genet       Date:  2002-03-25       Impact factor: 38.330

2.  Genome sequence of the plant pathogen Ralstonia solanacearum.

Authors:  M Salanoubat; S Genin; F Artiguenave; J Gouzy; S Mangenot; M Arlat; A Billault; P Brottier; J C Camus; L Cattolico; M Chandler; N Choisne; C Claudel-Renard; S Cunnac; N Demange; C Gaspin; M Lavie; A Moisan; C Robert; W Saurin; T Schiex; P Siguier; P Thébault; M Whalen; P Wincker; M Levy; J Weissenbach; C A Boucher
Journal:  Nature       Date:  2002-01-31       Impact factor: 49.962

3.  Geneticists get steamed up over public access to rice genome.

Authors:  Declan Butler
Journal:  Nature       Date:  2002-03-14       Impact factor: 49.962

4.  On the sequencing and assembly of the human genome.

Authors:  Eugene W Myers; Granger G Sutton; Hamilton O Smith; Mark D Adams; J Craig Venter
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

5.  Comparative genomic analysis of Vibrio cholerae: genes that correlate with cholera endemic and pandemic disease.

Authors:  Michelle Dziejman; Emmy Balon; Dana Boyd; Clare M Fraser; John F Heidelberg; John J Mekalanos
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-29       Impact factor: 11.205

6.  Large-scale analysis of the human and mouse transcriptomes.

Authors:  Andrew I Su; Michael P Cooke; Keith A Ching; Yaron Hakak; John R Walker; Tim Wiltshire; Anthony P Orth; Raquel G Vega; Lisa M Sapinoso; Aziz Moqrich; Ardem Patapoutian; Garret M Hampton; Peter G Schultz; John B Hogenesch
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

7.  On the sequencing of the human genome.

Authors:  Robert H Waterston; Eric S Lander; John E Sulston
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

8.  Subcellular localization of the yeast proteome.

Authors:  Anuj Kumar; Seema Agarwal; John A Heyman; Sandra Matson; Matthew Heidtman; Stacy Piccirillo; Lara Umansky; Amar Drawid; Ronald Jansen; Yang Liu; Kei-Hoi Cheung; Perry Miller; Mark Gerstein; G Shirleen Roeder; Michael Snyder
Journal:  Genes Dev       Date:  2002-03-15       Impact factor: 11.361

9.  Use of proteomic patterns in serum to identify ovarian cancer.

Authors:  Emanuel F Petricoin; Ali M Ardekani; Ben A Hitt; Peter J Levine; Vincent A Fusaro; Seth M Steinberg; Gordon B Mills; Charles Simone; David A Fishman; Elise C Kohn; Lance A Liotta
Journal:  Lancet       Date:  2002-02-16       Impact factor: 79.321

10.  A draft sequence of the rice genome (Oryza sativa L. ssp. indica).

Authors:  Jun Yu; Songnian Hu; Jun Wang; Gane Ka-Shu Wong; Songgang Li; Bin Liu; Yajun Deng; Li Dai; Yan Zhou; Xiuqing Zhang; Mengliang Cao; Jing Liu; Jiandong Sun; Jiabin Tang; Yanjiong Chen; Xiaobing Huang; Wei Lin; Chen Ye; Wei Tong; Lijuan Cong; Jianing Geng; Yujun Han; Lin Li; Wei Li; Guangqiang Hu; Xiangang Huang; Wenjie Li; Jian Li; Zhanwei Liu; Long Li; Jianping Liu; Qiuhui Qi; Jinsong Liu; Li Li; Tao Li; Xuegang Wang; Hong Lu; Tingting Wu; Miao Zhu; Peixiang Ni; Hua Han; Wei Dong; Xiaoyu Ren; Xiaoli Feng; Peng Cui; Xianran Li; Hao Wang; Xin Xu; Wenxue Zhai; Zhao Xu; Jinsong Zhang; Sijie He; Jianguo Zhang; Jichen Xu; Kunlin Zhang; Xianwu Zheng; Jianhai Dong; Wanyong Zeng; Lin Tao; Jia Ye; Jun Tan; Xide Ren; Xuewei Chen; Jun He; Daofeng Liu; Wei Tian; Chaoguang Tian; Hongai Xia; Qiyu Bao; Gang Li; Hui Gao; Ting Cao; Juan Wang; Wenming Zhao; Ping Li; Wei Chen; Xudong Wang; Yong Zhang; Jianfei Hu; Jing Wang; Song Liu; Jian Yang; Guangyu Zhang; Yuqing Xiong; Zhijie Li; Long Mao; Chengshu Zhou; Zhen Zhu; Runsheng Chen; Bailin Hao; Weimou Zheng; Shouyi Chen; Wei Guo; Guojie Li; Siqi Liu; Ming Tao; Jian Wang; Lihuang Zhu; Longping Yuan; Huanming Yang
Journal:  Science       Date:  2002-04-05       Impact factor: 47.728
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