Literature DB >> 18624889

Developmental validation of a Cannabis sativa STR multiplex system for forensic analysis.

Christopher Howard1, Simon Gilmore, James Robertson, Rod Peakall.   

Abstract

A developmental validation study based on recommendations of the Scientific Working Group on DNA Analysis Methods (SWGDAM) was conducted on a multiplex system of 10 Cannabis sativa short tandem repeat loci. Amplification of the loci in four multiplex reactions was tested across DNA from dried root, stem, and leaf sources, and DNA from fresh, frozen, and dried leaf tissue with a template DNA range of 10.0-0.01 ng. The loci were amplified and scored consistently for all DNA sources when DNA template was in the range of 10.0-1.0 ng. Some allelic dropout and PCR failure occurred in reactions with lower template DNA amounts. Overall, amplification was best using 10.0 ng of template DNA from dried leaf tissue indicating that this is the optimal source material. Cross species amplification was observed in Humulus lupulus for three loci but there was no allelic overlap. This is the first study following SWGDAM validation guidelines to validate short tandem repeat markers for forensic use in plants.

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Year:  2008        PMID: 18624889     DOI: 10.1111/j.1556-4029.2008.00792.x

Source DB:  PubMed          Journal:  J Forensic Sci        ISSN: 0022-1198            Impact factor:   1.832


  8 in total

1.  Real-Time PCR Quantification of Chloroplast DNA Supports DNA Barcoding of Plant Species.

Authors:  Hitomi S Kikkawa; Kouichiro Tsuge; Ritsuko Sugita
Journal:  Mol Biotechnol       Date:  2016-03       Impact factor: 2.695

2.  The validation of a 15 STR multiplex PCR for Cannabis species.

Authors:  Stephan Köhnemann; Johanna Nedele; Daniela Schwotzer; Julia Morzfeld; Heidi Pfeiffer
Journal:  Int J Legal Med       Date:  2012-05-10       Impact factor: 2.686

3.  Nuclear, chloroplast, and mitochondrial data of a US cannabis DNA database.

Authors:  Rachel Houston; Matthew Birck; Bobby LaRue; Sheree Hughes-Stamm; David Gangitano
Journal:  Int J Legal Med       Date:  2018-02-20       Impact factor: 2.686

4.  13-loci STR multiplex system for Brazilian seized samples of marijuana: individualization and origin differentiation.

Authors:  Mauro Sander Fett; Roberta Fogliatto Mariot; Eduardo Avila; Clarice Sampaio Alho; Valdir Marcos Stefenon; Flávio Anastácio de Oliveira Camargo
Journal:  Int J Legal Med       Date:  2018-10-15       Impact factor: 2.686

5.  Evaluation of a 13-loci STR multiplex system for Cannabis sativa genetic identification.

Authors:  Rachel Houston; Matthew Birck; Sheree Hughes-Stamm; David Gangitano
Journal:  Int J Legal Med       Date:  2015-12-10       Impact factor: 2.686

6.  Broad-Scale Genetic Diversity of Cannabis for Forensic Applications.

Authors:  Christophe Dufresnes; Catherine Jan; Friederike Bienert; Jérôme Goudet; Luca Fumagalli
Journal:  PLoS One       Date:  2017-01-20       Impact factor: 3.240

7.  Development and Validation of a Novel and Fast Detection Method for Cannabis sativa: A 19-Plex Short Tandem Repeat Typing System.

Authors:  Ruocheng Xia; Ruiyang Tao; Yiling Qu; Xiaochun Zhang; Huan Yu; Chunyan Yuan; Suhua Zhang; Chengtao Li
Journal:  Front Plant Sci       Date:  2022-02-28       Impact factor: 5.753

8.  Genetic Evaluation of In Vitro Micropropagated and Regenerated Plants of Cannabis sativa L. Using SSR Molecular Markers.

Authors:  Kostas Ioannidis; Ioanna Tomprou; Vangelis Mitsis; Polyxeni Koropouli
Journal:  Plants (Basel)       Date:  2022-09-29
  8 in total

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