Literature DB >> 18624516

A hierarchical transition state search algorithm.

Jorge M Del Campo1, Andreas M Köster.   

Abstract

A hierarchical transition state search algorithm is developed and its implementation in the density functional theory program deMon2k is described. This search algorithm combines the double ended saddle interpolation method with local uphill trust region optimization. A new formalism for the incorporation of the distance constrain in the saddle interpolation method is derived. The similarities between the constrained optimizations in the local trust region method and the saddle interpolation are highlighted. The saddle interpolation and local uphill trust region optimizations are validated on a test set of 28 representative reactions. The hierarchical transition state search algorithm is applied to an intramolecular Diels-Alder reaction with several internal rotors, which makes automatic transition state search rather challenging. The obtained reaction mechanism is discussed in the context of the experimentally observed product distribution.

Year:  2008        PMID: 18624516     DOI: 10.1063/1.2950083

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  Accuracy of auxiliary density functional theory hybrid calculations for activation and reaction enthalpies of pericyclic reactions.

Authors:  José R Gómez-Pérez; Francisco A Delesma; Patrizia Calaminici; Andreas M Köster
Journal:  J Mol Model       Date:  2018-08-04       Impact factor: 1.810

2.  Fast exploration of an optimal path on the multidimensional free energy surface.

Authors:  Changjun Chen
Journal:  PLoS One       Date:  2017-05-18       Impact factor: 3.240

  2 in total

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