Literature DB >> 18612983

Investigation of subpopulation heterogeneity and plasmid stability in recombinant escherichia coli via a simple segregated model.

W E Bentley1, O E Quiroga.   

Abstract

Many microbial and cell cultures exhibit phenomena that can best be described using a segregated modeling approach. Heterogeneties are more marked in recombinant cell cultures because subpopulations, which often exhibit different growth and productivity characteristics, are more easily identified by selective markers. A simple segregated mathematical model that simulates the growth of recombinant Escherichia coli cells is developed. Subpopulations of different growth rate, plasmid replication rate, and plasmid segregation probability are explicitly considered. Results indicate that a third mechanism of plasmid instability, referred to here as a "downward selective pressure," is significant when describing plasmid loss in batch and chemostat cultures. Also, the model agrees well with experimental data from cultures under antibiotic selective pressure. Finally, model simulations of chemostat cultures reveal the importance of initial conditions on culture stability and the possible presence of nonrandom partitioning functions. (c) 1993 John Wiley & Sons, Inc.

Entities:  

Year:  1993        PMID: 18612983     DOI: 10.1002/bit.260420210

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  11 in total

1.  Engineering complex biological systems in bacteria through recombinase-assisted genome engineering.

Authors:  Christine Nicole S Santos; Yasuo Yoshikuni
Journal:  Nat Protoc       Date:  2014-05-15       Impact factor: 13.491

2.  Plasmid expression level heterogeneity monitoring via heterologous eGFP production at the single-cell level in Cupriavidus necator.

Authors:  Catherine Boy; Julie Lesage; Sandrine Alfenore; Nathalie Gorret; Stéphane E Guillouet
Journal:  Appl Microbiol Biotechnol       Date:  2020-05-02       Impact factor: 4.813

3.  Optimization for a recombinant E. coli fed-batch fermentation.

Authors:  Q Chen; W E Bentley; W A Weigand
Journal:  Appl Biochem Biotechnol       Date:  1995       Impact factor: 2.926

4.  Eigensolutions and spectral analysis of a model for vertical gene transfer of plasmids.

Authors:  Eva Stadler
Journal:  J Math Biol       Date:  2018-11-19       Impact factor: 2.259

Review 5.  Production of recombinant proteins in E. coli by the heat inducible expression system based on the phage lambda pL and/or pR promoters.

Authors:  Norma A Valdez-Cruz; Luis Caspeta; Néstor O Pérez; Octavio T Ramírez; Mauricio A Trujillo-Roldán
Journal:  Microb Cell Fact       Date:  2010-03-19       Impact factor: 5.328

6.  Stabilized gene duplication enables long-term selection-free heterologous pathway expression.

Authors:  Keith E J Tyo; Parayil Kumaran Ajikumar; Gregory Stephanopoulos
Journal:  Nat Biotechnol       Date:  2009-07-26       Impact factor: 54.908

7.  Variability in subpopulation formation propagates into biocatalytic variability of engineered Pseudomonas putida strains.

Authors:  Martin Lindmeyer; Michael Jahn; Carsten Vorpahl; Susann Müller; Andreas Schmid; Bruno Bühler
Journal:  Front Microbiol       Date:  2015-10-01       Impact factor: 5.640

8.  A reduced genome decreases the host carrying capacity for foreign DNA.

Authors:  Yuya Akeno; Bei-Wen Ying; Saburo Tsuru; Tetsuya Yomo
Journal:  Microb Cell Fact       Date:  2014-04-01       Impact factor: 5.328

9.  Plasmid stability analysis based on a new theoretical model employing stochastic simulations.

Authors:  Olesia Werbowy; Sławomir Werbowy; Tadeusz Kaczorowski
Journal:  PLoS One       Date:  2017-08-28       Impact factor: 3.240

10.  Diverse genetic error modes constrain large-scale bio-based production.

Authors:  Peter Rugbjerg; Nils Myling-Petersen; Andreas Porse; Kira Sarup-Lytzen; Morten O A Sommer
Journal:  Nat Commun       Date:  2018-02-20       Impact factor: 14.919

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.