Literature DB >> 18608099

ALSOD: the Amyotrophic Lateral Sclerosis Online Database.

Richard Wroe1, Amy Wai-Ling Butler, Peter M Andersen, John F Powell, Ammar Al-Chalabi.   

Abstract

More than 100 point mutations spanning the 153 amino acid SOD1 sequence have been identified in individuals with ALS. In 1999 the Amyotrophic Lateral Sclerosis Database (ALSOD) was generated to store these mutations along with ALS patient information to facilitate the identification of a correlation between the SOD1 genotype with the ALS phenotype. Here we report our ongoing development and redesign of the ALSOD database and its automated procedures. The significant new features have improved ALSOD, helping link the mutations of the SOD1 gene to the hypothetical three-dimensional protein structural rearrangement, and the resulting ALS phenotype. Additionally, ALSOD now provides a more comprehensive knowledge base for ALS, detailing genetic, proteomic, and bioinformatics information associated with the disease. ALSOD can be accessed at http://alsod.iop.kcl.ac.uk/als/.

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Year:  2008        PMID: 18608099     DOI: 10.1080/17482960802146106

Source DB:  PubMed          Journal:  Amyotroph Lateral Scler        ISSN: 1471-180X


  51 in total

Review 1.  Mendelian bases of myopathies, cardiomyopathies, and neuromyopathies.

Authors:  G Piluso; S Aurino; M Cacciottolo; F Del Vecchio Blanco; A Lancioni; I L Rotundo; A Torella; V Nigro
Journal:  Acta Myol       Date:  2010-07

2.  Proteins that bind to misfolded mutant superoxide dismutase-1 in spinal cords from transgenic amyotrophic lateral sclerosis (ALS) model mice.

Authors:  Per Zetterström; Karin S Graffmo; Peter M Andersen; Thomas Brännström; Stefan L Marklund
Journal:  J Biol Chem       Date:  2011-04-14       Impact factor: 5.157

Review 3.  Clinical genetics of amyotrophic lateral sclerosis: what do we really know?

Authors:  Peter M Andersen; Ammar Al-Chalabi
Journal:  Nat Rev Neurol       Date:  2011-10-11       Impact factor: 42.937

Review 4.  Gene discovery in amyotrophic lateral sclerosis: implications for clinical management.

Authors:  Ammar Al-Chalabi; Leonard H van den Berg; Jan Veldink
Journal:  Nat Rev Neurol       Date:  2016-12-16       Impact factor: 42.937

5.  A theoretical study on Zn binding loop mutants instigating destabilization and metal binding loss in human SOD1 protein.

Authors:  E Srinivasan; Rao Sethumadhavan; R Rajasekaran
Journal:  J Mol Model       Date:  2017-03-07       Impact factor: 1.810

6.  Computational Investigation on Electrostatic Loop Mutants Instigating Destabilization and Aggregation on Human SOD1 Protein Causing Amyotrophic Lateral Sclerosis.

Authors:  E Srinivasan; R Rajasekaran
Journal:  Protein J       Date:  2019-02       Impact factor: 2.371

7.  Composition of soluble misfolded superoxide dismutase-1 in murine models of amyotrophic lateral sclerosis.

Authors:  Per Zetterström; Karin S Graffmo; Peter M Andersen; Thomas Brännström; Stefan L Marklund
Journal:  Neuromolecular Med       Date:  2012-10-18       Impact factor: 3.843

Review 8.  Genetics of motor neuron disorders: new insights into pathogenic mechanisms.

Authors:  Patrick A Dion; Hussein Daoud; Guy A Rouleau
Journal:  Nat Rev Genet       Date:  2009-10-13       Impact factor: 53.242

9.  Two superoxide dismutase prion strains transmit amyotrophic lateral sclerosis-like disease.

Authors:  Elaheh Ekhtiari Bidhendi; Johan Bergh; Per Zetterström; Peter M Andersen; Stefan L Marklund; Thomas Brännström
Journal:  J Clin Invest       Date:  2016-05-03       Impact factor: 14.808

10.  An integrated approach to the interpretation of single amino acid polymorphisms within the framework of CATH and Gene3D.

Authors:  Jose M G Izarzugaza; Anja Baresic; Lisa E M McMillan; Corin Yeats; Andrew B Clegg; Christine A Orengo; Andrew C R Martin; Alfonso Valencia
Journal:  BMC Bioinformatics       Date:  2009-08-27       Impact factor: 3.169

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