Literature DB >> 18606793

PCR detection of type I polyketide synthase genes in myxobacteria.

Hisayuki Komaki1, Ryosuke Fudou, Takashi Iizuka, Daisuke Nakajima, Koei Okazaki, Daisuke Shibata, Makoto Ojika, Shigeaki Harayama.   

Abstract

The diversity of type I modular polyketide synthase (PKS) was explored by PCR amplification of DNA encoding ketosynthase and acyltransferase domains in myxobacteria. The sequencing of the amplicons revealed that many PKS genes were distantly related to the published sequences. Thus, myxobacteria may be excellent resources for novel and diverse polyketides.

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Year:  2008        PMID： 18606793      PMCID： PMC2546657          DOI： 10.1128/AEM.00224-08

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  27 in total

Review 1.  Myxobacteria, producers of novel bioactive substances.

Authors:  H Reichenbach
Journal:  J Ind Microbiol Biotechnol       Date:  2001-09       Impact factor: 3.346

2.  The biosynthesis of the aromatic myxobacterial electron transport inhibitor stigmatellin is directed by a novel type of modular polyketide synthase.

Authors:  Nikolaos Gaitatzis; Barbara Silakowski; Brigitte Kunze; Gabriele Nordsiek; Helmut Blöcker; Gerhard Höfle; Rolf Müller
Journal:  J Biol Chem       Date:  2002-01-23       Impact factor: 5.157

3.  Haliangium ochraceum gen. nov., sp. nov. and Haliangium tepidum sp. nov.: novel moderately halophilic myxobacteria isolated from coastal saline environments.

Authors:  Ryosuke Fudou; Yasuko Jojima; Takashi Iizuka; Shigeru Yamanaka
Journal:  J Gen Appl Microbiol       Date:  2002-04       Impact factor: 1.452

4.  Enhygromyxa salina gen. nov., sp. nov., a slightly halophilic myxobacterium isolated from the coastal areas of Japan.

Authors:  Takashi Iizuka; Yasuko Jojima; Ryosuke Fudou; Mitsunori Tokura; Akira Hiraishi; Shigeru Yamanaka
Journal:  Syst Appl Microbiol       Date:  2003-06       Impact factor: 4.022

5.  Melithiazol biosynthesis: further insights into myxobacterial PKS/NRPS systems and evidence for a new subclass of methyl transferases.

Authors:  Stefan Weinig; Hans-Jürgen Hecht; Taifo Mahmud; Rolf Müller
Journal:  Chem Biol       Date:  2003-10

6.  Naturally mosaic operons for secondary metabolite biosynthesis: variability and putative horizontal transfer of discrete catalytic domains of the epothilone polyketide synthase locus.

Authors:  J V Lopez
Journal:  Mol Genet Genomics       Date:  2003-11-01       Impact factor: 3.291

7.  Evolutionary diversity of ketoacyl synthases in cellulolytic myxobacterium Sorangium.

Authors:  Zhi-Feng Li; Jing-Yi Zhao; Zhi-Jie Xia; Jun Shi; Hong Liu; Zhi-Hong Wu; Wei Hu; Wei-Feng Liu; Yue-Zhong Li
Journal:  Syst Appl Microbiol       Date:  2006-08-08       Impact factor: 4.022

8.  Novel features in a combined polyketide synthase/non-ribosomal peptide synthetase: the myxalamid biosynthetic gene cluster of the myxobacterium Stigmatella aurantiaca Sga15.

Authors:  B Silakowski; G Nordsiek; B Kunze; H Blöcker; R Müller
Journal:  Chem Biol       Date:  2001-01

9.  New lessons for combinatorial biosynthesis from myxobacteria. The myxothiazol biosynthetic gene cluster of Stigmatella aurantiaca DW4/3-1.

Authors:  B Silakowski; H U Schairer; H Ehret; B Kunze; S Weinig; G Nordsiek; P Brandt; H Blöcker; G Höfle; S Beyer; R Müller
Journal:  J Biol Chem       Date:  1999-12-24       Impact factor: 5.157

10.  Plesiocystis pacifica gen. nov., sp. nov., a marine myxobacterium that contains dihydrogenated menaquinone, isolated from the Pacific coasts of Japan.

Authors:  Takashi Iizuka; Yasuko Jojima; Ryosuke Fudou; Akira Hiraishi; Jong-Woong Ahn; Shigeru Yamanaka
Journal:  Int J Syst Evol Microbiol       Date:  2003-01       Impact factor: 2.747
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  10 in total

1.  Marine myxobacteria as a source of antibiotics--comparison of physiology, polyketide-type genes and antibiotic production of three new isolates of Enhygromyxa salina.

Authors:  Till F Schäberle; Emilie Goralski; Edith Neu; Ozlem Erol; Georg Hölzl; Peter Dörmann; Gabriele Bierbaum; Gabriele M König
Journal:  Mar Drugs       Date:  2010-09-03       Impact factor: 5.118

2.  Complete genome sequence of Haliangium ochraceum type strain (SMP-2).

Authors:  Natalia Ivanova; Chris Daum; Elke Lang; Birte Abt; Markus Kopitz; Elizabeth Saunders; Alla Lapidus; Susan Lucas; Tijana Glavina Del Rio; Matt Nolan; Hope Tice; Alex Copeland; Jan-Fang Cheng; Feng Chen; David Bruce; Lynne Goodwin; Sam Pitluck; Konstantinos Mavromatis; Amrita Pati; Natalia Mikhailova; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; John C Detter; Thomas Brettin; Manfred Rohde; Markus Göker; Jim Bristow; Victor Markowitz; Jonathan A Eisen; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2010-01-28

3.  Paenimacrolidin, a novel macrolide antibiotic from Paenibacillus sp. F6-B70 active against methicillin-resistant Staphylococcus aureus.

Authors:  Xue-Chang Wu; Chao-Dong Qian; Hai-Huan Fang; Yan-Ping Wen; Jian-Ying Zhou; Zha-Jun Zhan; Rui Ding; Ou Li; Haichun Gao
Journal:  Microb Biotechnol       Date:  2010-08-19       Impact factor: 5.813

4.  Heterologous Production of the Marine Myxobacterial Antibiotic Haliangicin and Its Unnatural Analogues Generated by Engineering of the Biochemical Pathway.

Authors:  Yuwei Sun; Zhiyang Feng; Tomohiko Tomura; Akira Suzuki; Seishi Miyano; Takashi Tsuge; Hitoshi Mori; Joo-Won Suh; Takashi Iizuka; Ryosuke Fudou; Makoto Ojika
Journal:  Sci Rep       Date:  2016-02-26       Impact factor: 4.379

5.  An Unusual Diterpene-Enhygromic Acid and Deoxyenhygrolides from a Marine Myxobacterium, Enhygromyxa sp.

Authors:  Tomohiko Tomura; Shiori Nagashima; Satoshi Yamazaki; Takashi Iizuka; Ryosuke Fudou; Makoto Ojika
Journal:  Mar Drugs       Date:  2017-04-06       Impact factor: 5.118

Review 6.  Future Directions of Marine Myxobacterial Natural Product Discovery Inferred from Metagenomics.

Authors:  Ronald Garcia; James J La Clair; Rolf Müller
Journal:  Mar Drugs       Date:  2018-08-29       Impact factor: 5.118

Review 7.  Marine-derived myxobacteria of the suborder Nannocystineae: An underexplored source of structurally intriguing and biologically active metabolites.

Authors:  Antonio Dávila-Céspedes; Peter Hufendiek; Max Crüsemann; Till F Schäberle; Gabriele M König
Journal:  Beilstein J Org Chem       Date:  2016-05-13       Impact factor: 2.883

Review 8.  Investigating the Biosynthesis of Natural Products from Marine Proteobacteria: A Survey of Molecules and Strategies.

Authors:  Marshall L Timmermans; Yagya P Paudel; Avena C Ross
Journal:  Mar Drugs       Date:  2017-08-01       Impact factor: 5.118

Review 9.  Marine Myxobacteria: A Few Good Halophiles.

Authors:  Hanan Albataineh; D Cole Stevens
Journal:  Mar Drugs       Date:  2018-06-14       Impact factor: 5.118

10.  New Deoxyenhygrolides from Plesiocystis pacifica Provide Insights into Butenolide Core Biosynthesis.

Authors:  Joachim J Hug; Louise Kjaerulff; Ronald Garcia; Rolf Müller
Journal:  Mar Drugs       Date:  2022-01-14       Impact factor: 5.118
  10 in total

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