Literature DB >> 18603348

Correlation between Raman and X-ray crystallography data of (Pro-Pro-Gly)10.

Antonello Merlino1, Filomena Sica, Lelio Mazzarella, Adriana Zagari, Alessandro Vergara.   

Abstract

Model biopolymers are powerful tools to guide the interpretation of physical properties in complex systems. (Pro-Pro-Gly)10, (PPG)10, is a collagen-model peptide, whose structure is known at high resolution. Herein, Raman microscopy data of (PPG)10 powders and single crystals are reported. The spectra interpretation leads to an accurate assignment of three well-resolved amide bands corresponding to the three peptide bonds (PP, PG and GP) present in the (PPG)10 structure. These data together with the availability of torsional angles phi and psi derived from the high-resolution crystal structure, provide the opportunity to test the validity of theoretical equations for the calculation of non-canonical amide III bands and represent a reference for theoretical calculations of vibrational spectra and for polyproline II detection in complex proteins. Spectroscopic data do not support the indication of two distinct and equally populated up and down conformations of the pyrrolidine rings observed in the (PPG)10 crystal structure.

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Year:  2008        PMID: 18603348     DOI: 10.1016/j.bpc.2008.06.008

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  3 in total

1.  Crystallization, preliminary X-ray diffraction studies and Raman microscopy of the major haemoglobin from the sub-Antarctic fish Eleginops maclovinus in the carbomonoxy form.

Authors:  Antonello Merlino; Luigi Vitagliano; Anna Balsamo; Francesco P Nicoletti; Barry D Howes; Daniela Giordano; Daniela Coppola; Guido di Prisco; Cinzia Verde; Giulietta Smulevich; Lelio Mazzarella; Alessandro Vergara
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-10-29

2.  Solid-phase synthesis, characterization, and cellular activities of collagen-model nanodiamond-peptide conjugates.

Authors:  Anna M Knapinska; Dorota Tokmina-Roszyk; Sabrina Amar; Michal Tokmina-Roszyk; Vadym N Mochalin; Yury Gogotsi; Patrick Cosme; Andrew C Terentis; Gregg B Fields
Journal:  Biopolymers       Date:  2015-05       Impact factor: 2.505

3.  The process of EDC-NHS Cross-linking of reconstituted collagen fibres increases collagen fibrillar order and alignment.

Authors:  D V Shepherd; J H Shepherd; S Ghose; S J Kew; R E Cameron; S M Best
Journal:  APL Mater       Date:  2015-01       Impact factor: 5.096

  3 in total

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