Literature DB >> 18602266

Different evolutionary trails in the related genomes Cricetus cricetus and Peromyscus eremicus (Rodentia, Cricetidae) uncovered by orthologous satellite DNA repositioning.

Sandra Louzada1, Ana Paço, Svatava Kubickova, Filomena Adega, Henrique Guedes-Pinto, Jiri Rubes, Raquel Chaves.   

Abstract

Constitutive heterochromatin comprises a substantial fraction of the eukaryotic genomes and is mainly composed of tandemly arrayed satellite DNAs (satDNA). These repetitive sequences represent a very dynamic and fast evolving component of genomes. In the present work we report the isolation of Cricetus cricetus (CCR, Cricetidae, Rodentia) centromeric repetitive sequences from chromosome 4 (CCR4/10sat), using the laser microdissection and laser pressure catapulting procedure, followed by DOP-PCR amplification and labelling. Physical mapping by fluorescent in situ hybridisation of these sequences onto C. cricetus and another member of Cricetidae, Peromyscus eremicus, displayed quite interesting patterns. Namely, the centromeric sequences showed to be present in another C. cricetus chromosome (CCR10) besides CCR4. Moreover, these almost chromosome-specific sequences revealed to be present in the P. eremicus genome, and most interestingly, displaying a ubiquitous scattered distribution throughout this karyotype. Finally and in both species, a co-localisation of CCR4/10sat with constitutive heterochromatin was found, either by classical C-banding or C-banding sequential to in situ endonuclease restriction. The presence of these orthologous sequences in both genomes is suggestive of a phylogenetic proximity. Furthermore, the existence of common repetitive DNA sequences with a different chromosomal location foresees the occurrence of an extensive process of karyotype restructuring somehow related with intragenomic movements of these repetitive sequences during the evolutionary process of C. cricetus and P. eremicus species.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18602266     DOI: 10.1016/j.micron.2008.05.008

Source DB:  PubMed          Journal:  Micron        ISSN: 0968-4328            Impact factor:   2.251


  8 in total

1.  Divergent patterns of breakpoint reuse in Muroid rodents.

Authors:  E E Mlynarski; C J Obergfell; M J O'Neill; R J O'Neill
Journal:  Mamm Genome       Date:  2009-12-22       Impact factor: 2.957

2.  LINE-1 retrotransposons: from 'parasite' sequences to functional elements.

Authors:  Ana Paço; Filomena Adega; Raquel Chaves
Journal:  J Appl Genet       Date:  2014-08-09       Impact factor: 3.240

3.  Tribe-specific satellite DNA in non-domestic Bovidae.

Authors:  Olga Kopecna; Svatava Kubickova; Halina Cernohorska; Katerina Cabelova; Jiri Vahala; Natalia Martinkova; Jiri Rubes
Journal:  Chromosome Res       Date:  2014-01-23       Impact factor: 5.239

4.  Isolation and comparison of tribe-specific centromeric repeats within Bovidae.

Authors:  Olga Kopecna; Svatava Kubickova; Halina Cernohorska; Katerina Cabelova; Jiri Vahala; Jiri Rubes
Journal:  J Appl Genet       Date:  2012-01-17       Impact factor: 3.240

5.  Chromosomal evolution in Rattini (Muridae, Rodentia).

Authors:  Daleen Badenhorst; Gauthier Dobigny; Filomena Adega; Raquel Chaves; Patricia C M O'Brien; Malcolm A Ferguson-Smith; Paul D Waters; Terence J Robinson
Journal:  Chromosome Res       Date:  2011-08-18       Impact factor: 5.239

6.  Nanger, Eudorcas, Gazella, and Antilope form a well-supported chromosomal clade within Antilopini (Bovidae, Cetartiodactyla).

Authors:  Halina Cernohorska; Svatava Kubickova; Olga Kopecna; Miluse Vozdova; Conrad A Matthee; Terence J Robinson; Jiri Rubes
Journal:  Chromosoma       Date:  2014-11-23       Impact factor: 4.316

7.  The puzzling character of repetitive DNA in Phodopus genomes (Cricetidae, Rodentia).

Authors:  Ana Paço; Filomena Adega; Nevenka Meštrović; Miroslav Plohl; Raquel Chaves
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

Review 8.  Decoding the Role of Satellite DNA in Genome Architecture and Plasticity-An Evolutionary and Clinical Affair.

Authors:  Sandra Louzada; Mariana Lopes; Daniela Ferreira; Filomena Adega; Ana Escudeiro; Margarida Gama-Carvalho; Raquel Chaves
Journal:  Genes (Basel)       Date:  2020-01-09       Impact factor: 4.096

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.