Literature DB >> 18601558

Diagnosis of gastric cancer using near-infrared Raman spectroscopy and classification and regression tree techniques.

Seng Khoon Teh1, Wei Zheng, Khek Yu Ho, Ming Teh, Khay Guan Yeoh, Zhiwei Huang.   

Abstract

The purpose of this study is to apply near-infrared (NIR) Raman spectroscopy and classification and regression tree (CART) techniques for identifying molecular changes of tissue associated with cancer transformation. A rapid-acquisition NIR Raman system is utilized for tissue Raman spectroscopic measurements at 785-nm excitation. 73 gastric tissue samples (55 normal, 18 cancer) from 53 patients are measured. The CART technique is introduced to develop effective diagnostic algorithms for classification of Raman spectra of different gastric tissues. 80% of the Raman dataset are randomly selected for spectral learning, while 20% of the dataset are reserved for validation. High-quality Raman spectra in the range of 800 to 1800 cm(-1) are acquired from gastric tissue within 5 s. The diagnostic sensitivity and specificity of the learning dataset are 90.2 and 95.7%; and the predictive sensitivity and specificity of the independent validation dataset are 88.9 and 92.9%, respectively, for separating cancer from normal. The tissue Raman peaks at 875 and 1745 cm(-1) are found to be two of the most significant features to discriminate gastric cancer from normal tissue. NIR Raman spectroscopy in conjunction with the CART technique has the potential to provide an effective and accurate diagnostic means for cancer detection in the gastric system.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18601558     DOI: 10.1117/1.2939406

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  15 in total

1.  An empirical assessment of validation practices for molecular classifiers.

Authors:  Peter J Castaldi; Issa J Dahabreh; John P A Ioannidis
Journal:  Brief Bioinform       Date:  2011-02-07       Impact factor: 11.622

2.  High-Speed Nonlinear Interferometric Vibrational Imaging of Biological Tissue With Comparison to Raman Microscopy.

Authors:  Wladimir A Benalcazar; Praveen D Chowdary; Zhi Jiang; Daniel L Marks; Eric J Chaney; Martin Gruebele; Stephen A Boppart
Journal:  IEEE J Quantum Electron       Date:  2009-12-04       Impact factor: 2.318

3.  Role of optical spectroscopy using endogenous contrasts in clinical cancer diagnosis.

Authors:  Quan Liu
Journal:  World J Clin Oncol       Date:  2011-01-10

4.  Nonlinear interferometric vibrational imaging for fast label-free visualization of molecular domains in skin.

Authors:  Wladimir A Benalcazar; Stephen A Boppart
Journal:  Anal Bioanal Chem       Date:  2011-04-05       Impact factor: 4.142

5.  Intelligent Classification of Japonica Rice Growth Duration (GD) Based on CapsNets.

Authors:  Xin Zhao; Jianpei Zhang; Jing Yang; Bo Ma; Rui Liu; Jifang Hu
Journal:  Plants (Basel)       Date:  2022-06-15

6.  Rapid discrimination of malignant lesions from normal gastric tissues utilizing Raman spectroscopy system: a meta-analysis.

Authors:  Huan Ouyang; Jiahui Xu; Zhengjie Zhu; Tengyun Long; Changjun Yu
Journal:  J Cancer Res Clin Oncol       Date:  2015-04-26       Impact factor: 4.553

Review 7.  Clinical instrumentation and applications of Raman spectroscopy.

Authors:  Isaac Pence; Anita Mahadevan-Jansen
Journal:  Chem Soc Rev       Date:  2016-04-07       Impact factor: 54.564

8.  Raman spectroscopic methods for classification of normal and malignant hypopharyngeal tissues: an exploratory study.

Authors:  Parul Pujary; K Maheedhar; C Murali Krishna; Kailesh Pujary
Journal:  Patholog Res Int       Date:  2011-07-24

9.  Label-free diagnostics and cancer surgery Raman spectra guidance for the human colon at different excitation wavelengths.

Authors:  Beata Brozek-Pluska; Krystian Miazek; Jacek Musiał; Radzislaw Kordek
Journal:  RSC Adv       Date:  2019-12-06       Impact factor: 4.036

Review 10.  Endoscopic Raman Spectroscopy for Molecular Fingerprinting of Gastric Cancer: Principle to Implementation.

Authors:  Hyung Hun Kim
Journal:  Biomed Res Int       Date:  2015-05-27       Impact factor: 3.411

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.