Literature DB >> 18598012

Thermodynamics of the hydroxyl radical addition to isoprene.

Marco A Allodi1, Karl N Kirschner, George C Shields.   

Abstract

Oxidation of isoprene by the hydroxyl radical leads to tropospheric ozone formation. Consequently, a more complete understanding of this reaction could lead to better models of regional air quality, a better understanding of aerosol formation, and a better understanding of reaction kinetics and dynamics. The most common first step in the oxidation of isoprene is the formation of an adduct, with the hydroxyl radical adding to one of four unsaturated carbon atoms in isoprene. In this paper, we discuss how the initial conformations of isoprene, s-trans and s-gauche, influences the pathways to adduct formation. We explore the formation of pre-reactive complexes at low and high temperatures, which are often invoked to explain the negative temperature dependence of this reaction's kinetics. We show that at higher temperatures the free energy surface indicates that a pre-reactive complex is unlikely, while at low temperatures the complex exists on two reaction pathways. The theoretical results show that at low temperatures all eight pathways possess negative reaction barriers, and reaction energies that range from -36.7 to -23.0 kcal x mol(-1). At temperatures in the lower atmosphere, all eight pathways possess positive reaction barriers that range from 3.8 to 6.0 kcal x mol(-1) and reaction energies that range from -28.8 to -14.4 kcal x mol(-1).

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Year:  2008        PMID: 18598012      PMCID: PMC2488963          DOI: 10.1021/jp801869c

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  14 in total

1.  Rates and temperature dependences of the reaction of hydroxyl radical with isoprene, its oxidation products, and selected terpenes.

Authors:  T E Kleindienst; G W Harris; J N Pitts
Journal:  Environ Sci Technol       Date:  1982-12-01       Impact factor: 9.028

2.  Conformational thermodynamic and kinetic parameters of methyl-substituted 1,3-butadienes.

Authors:  Michael E Squillacote; Fengting Liang
Journal:  J Org Chem       Date:  2005-08-19       Impact factor: 4.354

3.  Does isoprene protect plant membranes from thermal shock? A molecular dynamics study.

Authors:  Magdalena E Siwko; Siewert J Marrink; Alex H de Vries; Arkadiusz Kozubek; Anton J M Schoot Uiterkamp; Alan E Mark
Journal:  Biochim Biophys Acta       Date:  2006-10-04

4.  A two transition state model for radical-molecule reactions: applications to isomeric branching in the OH-isoprene reaction.

Authors:  Erin E Greenwald; Simon W North; Yuri Georgievskii; Stephen J Klippenstein
Journal:  J Phys Chem A       Date:  2007-06-01       Impact factor: 2.781

5.  Monitoring OH-initiated oxidation kinetics of isoprene and its products using online mass spectrometry.

Authors:  Woojin Lee; Munkhbayar Baasandorj; Philip S Stevens; Ronald A Hites
Journal:  Environ Sci Technol       Date:  2005-02-15       Impact factor: 9.028

6.  Spectroscopic implications of partially quenched orbital angular momentum in the OH-water complex.

Authors:  Mark D Marshall; Marsha I Lester
Journal:  J Phys Chem B       Date:  2005-05-05       Impact factor: 2.991

7.  Infrared spectrum and stability of a pi-type hydrogen-bonded complex between the OH and C2H2 reactants.

Authors:  James B Davey; Margaret E Greenslade; Mark D Marshall; Marsha I Lester; Martyn D Wheeler
Journal:  J Chem Phys       Date:  2004-08-15       Impact factor: 3.488

8.  Spectroscopic implications of the coupling of unquenched angular momentum to rotation in OH-containing complexes.

Authors:  Mark D Marshall; Marsha I Lester
Journal:  J Chem Phys       Date:  2004-08-15       Impact factor: 3.488

9.  Quantification of hydroxycarbonyls from OH-isoprene reactions.

Authors:  Jun Zhao; Renyi Zhang; Edward C Fortner; Simon W North
Journal:  J Am Chem Soc       Date:  2004-03-10       Impact factor: 15.419

10.  Evidence for partial quenching of orbital angular momentum upon complex formation in the infrared spectrum of OH-acetylene.

Authors:  Mark D Marshall; James B Davey; Margaret E Greenslade; Marsha I Lester
Journal:  J Chem Phys       Date:  2004-09-22       Impact factor: 3.488

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