Literature DB >> 18594947

Transdab wiki: the interactive transglutaminase substrate database on web 2.0 surface.

Eva Csosz1, Bertalan Meskó, László Fésüs.   

Abstract

TRANSDAB wiki is a database of transglutaminase substrate proteins. This wiki is designed to provide quality content of all the details (including synonyms, structures, references) about transglutaminase substrate proteins and interaction partners. Currently TRANSDAB contains 243 articles about substrate proteins for 6 transglutaminase types in a user-friendly, editable format. Our aim was to collect structural information about substrate proteins and this information is provided in form of images, videos and links. The scientific community is invited to edit the database and besides providing up-to-date information, this wiki should serve as a platform for valuable discussions.

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Year:  2008        PMID： 18594947     DOI： 10.1007/s00726-008-0121-y

Source DB:  PubMed          Journal:  Amino Acids        ISSN： 0939-4451            Impact factor:   3.520


  23 in total

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3.  Building blocks for a clinical imaging informatics environment.

Authors:  Marc D Kohli; Max Warnock; Mark Daly; Christopher Toland; Chris Meenan; Paul G Nagy
Journal:  J Digit Imaging       Date:  2014-04       Impact factor: 4.056

4.  Evaluating factor XIII specificity for glutamine-containing substrates using a matrix-assisted laser desorption/ionization time-of-flight mass spectrometry assay.

Authors:  Prakash G Doiphode; Marina V Malovichko; Kelly Njine Mouapi; Muriel C Maurer
Journal:  Anal Biochem       Date:  2014-04-19       Impact factor: 3.365

Review 5.  TFOS DEWS II Tear Film Report.

Authors:  Mark D P Willcox; Pablo Argüeso; Georgi A Georgiev; Juha M Holopainen; Gordon W Laurie; Tom J Millar; Eric B Papas; Jannick P Rolland; Tannin A Schmidt; Ulrike Stahl; Tatiana Suarez; Lakshman N Subbaraman; Omür Ö Uçakhan; Lyndon Jones
Journal:  Ocul Surf       Date:  2017-07-20       Impact factor: 5.033

6.  Coagulation factor XIIIa substrates in human plasma: identification and incorporation into the clot.

Authors:  Camilla Lund Nikolajsen; Thomas F Dyrlund; Ebbe Toftgaard Poulsen; Jan J Enghild; Carsten Scavenius
Journal:  J Biol Chem       Date:  2014-01-17       Impact factor: 5.157

Review 7.  Substrates, inhibitors, and probes of mammalian transglutaminase 2.

Authors:  Ruize Zhuang; Chaitan Khosla
Journal:  Anal Biochem       Date:  2019-12-24       Impact factor: 3.365

Review 8.  Physiological, pathological, and structural implications of non-enzymatic protein-protein interactions of the multifunctional human transglutaminase 2.

Authors:  Kajal Kanchan; Mónika Fuxreiter; László Fésüs
Journal:  Cell Mol Life Sci       Date:  2015-05-06       Impact factor: 9.261

9.  Rapid interactome profiling by massive sequencing.

Authors:  Roberto Di Niro; Ana-Marija Sulic; Flavio Mignone; Sara D'Angelo; Roberta Bordoni; Michele Iacono; Roberto Marzari; Tiziano Gaiotto; Miha Lavric; Andrew R M Bradbury; Luigi Biancone; Dina Zevin-Sonkin; Gianluca De Bellis; Claudio Santoro; Daniele Sblattero
Journal:  Nucleic Acids Res       Date:  2010-02-09       Impact factor: 16.971

10.  A non-reactive glutamine residue of alpha2-antiplasmin promotes interactions with the factor XIII active site region.

Authors:  D B Cleary; P G Doiphode; T M Sabo; M C Maurer
Journal:  J Thromb Haemost       Date:  2009-08-19       Impact factor: 5.824
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