Literature DB >> 18583986

The nature and character of the transition state for the ADP-ribosyltransferase reaction.

René Jørgensen1, Yolanda Wang, Danielle Visschedyk, A Rod Merrill.   

Abstract

Exotoxin A (ExoA) from Pseudomonas aeruginosa is an important virulence factor that belongs to a class of exotoxins that are secreted by pathogenic bacteria which cause human diseases such as cholera, diphtheria, pneumonia and whooping cough. We present the first crystal structures, to our knowledge, of ExoA in complex with elongation factor 2 (eEF2) and intact NAD(+), which indicate a direct role of two active-site loops in ExoA during the catalytic cycle. One loop moves to form a solvent cover for the active site of the enzyme and reaches towards the target residue (diphthamide) in eEF2 forming an important hydrogen bond. The NAD(+) substrate adopts a conformation remarkably different from that of the NAD(+) analogue, betaTAD, observed in previous structures, and fails to trigger any loop movements. Mutational studies of the two loops in the toxin identify several residues important for catalytic activity, in particular Glu 546 and Arg 551, clearly supporting the new complex structures. On the basis of these data, we propose a transition-state model for the toxin-catalysed reaction.

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Year:  2008        PMID: 18583986      PMCID: PMC2515215          DOI: 10.1038/embor.2008.90

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   9.071


  26 in total

1.  Improved methods for building protein models in electron density maps and the location of errors in these models.

Authors:  T A Jones; J Y Zou; S W Cowan; M Kjeldgaard
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Review 2.  Bacterial exotoxins.

Authors:  Michel R Popoff
Journal:  Contrib Microbiol       Date:  2005

3.  Structural basis for the activation of cholera toxin by human ARF6-GTP.

Authors:  Claire J O'Neal; Michael G Jobling; Randall K Holmes; Wim G J Hol
Journal:  Science       Date:  2005-08-12       Impact factor: 47.728

4.  Crystal structure of ADP-ribosylated ribosomal translocase from Saccharomyces cerevisiae.

Authors:  René Jørgensen; Susan P Yates; David J Teal; Jakob Nilsson; Gerry A Prentice; A Rod Merrill; Gregers Rom Andersen
Journal:  J Biol Chem       Date:  2004-08-16       Impact factor: 5.157

5.  ADP-ribosylation of elongation factor 2 by diphtheria toxin. NMR spectra and proposed structures of ribosyl-diphthamide and its hydrolysis products.

Authors:  B G Van Ness; J B Howard; J W Bodley
Journal:  J Biol Chem       Date:  1980-11-25       Impact factor: 5.157

Review 6.  Stealth and mimicry by deadly bacterial toxins.

Authors:  Susan P Yates; René Jørgensen; Gregers R Andersen; A Rod Merrill
Journal:  Trends Biochem Sci       Date:  2006-01-06       Impact factor: 14.264

Review 7.  Diphtheria toxin and Pseudomonas aeruginosa exotoxin A: active-site structure and enzymic mechanism.

Authors:  B A Wilson; R J Collier
Journal:  Curr Top Microbiol Immunol       Date:  1992       Impact factor: 4.737

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Authors:  B K Beattie; G A Prentice; A R Merrill
Journal:  Biochemistry       Date:  1996-12-03       Impact factor: 3.321

Review 9.  Functional aspects of protein mono-ADP-ribosylation.

Authors:  Daniela Corda; Maria Di Girolamo
Journal:  EMBO J       Date:  2003-05-01       Impact factor: 11.598

10.  Insight into the catalytic mechanism of Pseudomonas aeruginosa exotoxin A. Studies of toxin interaction with eukaryotic elongation factor-2.

Authors:  Souzan Armstrong; Susan P Yates; A Rod Merrill
Journal:  J Biol Chem       Date:  2002-09-20       Impact factor: 5.486

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  41 in total

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Authors:  Robert J Fieldhouse; René Jørgensen; Miguel R Lugo; A Rod Merrill
Journal:  J Biol Chem       Date:  2012-04-25       Impact factor: 5.157

2.  C3larvin toxin, an ADP-ribosyltransferase from Paenibacillus larvae.

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Journal:  J Biol Chem       Date:  2014-12-04       Impact factor: 5.157

3.  Substrate N2 atom recognition mechanism in pierisin family DNA-targeting, guanine-specific ADP-ribosyltransferase ScARP.

Authors:  Toru Yoshida; Hideaki Tsuge
Journal:  J Biol Chem       Date:  2018-08-02       Impact factor: 5.157

4.  Chemogenomic approach identified yeast YLR143W as diphthamide synthetase.

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Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-19       Impact factor: 11.205

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Authors:  Toshiharu Tsurumura; Yayoi Tsumori; Hao Qiu; Masataka Oda; Jun Sakurai; Masahiro Nagahama; Hideaki Tsuge
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-04       Impact factor: 11.205

Review 6.  The natural history of ADP-ribosyltransferases and the ADP-ribosylation system.

Authors:  L Aravind; Dapeng Zhang; Robson F de Souza; Swadha Anand; Lakshminarayan M Iyer
Journal:  Curr Top Microbiol Immunol       Date:  2015       Impact factor: 4.291

7.  Pseudomonas aeruginosa exotoxin T induces potent cytotoxicity against a variety of murine and human cancer cell lines.

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Journal:  J Med Microbiol       Date:  2015-02       Impact factor: 2.472

8.  Certhrax toxin, an anthrax-related ADP-ribosyltransferase from Bacillus cereus.

Authors:  Danielle Visschedyk; Amanda Rochon; Wolfram Tempel; Svetoslav Dimov; Hee-Won Park; A Rod Merrill
Journal:  J Biol Chem       Date:  2012-09-19       Impact factor: 5.157

Review 9.  Insights into the biogenesis, function, and regulation of ADP-ribosylation.

Authors:  Michael S Cohen; Paul Chang
Journal:  Nat Chem Biol       Date:  2018-02-14       Impact factor: 15.040

10.  Characterization of an actin-targeting ADP-ribosyltransferase from Aeromonas hydrophila.

Authors:  Adin Shniffer; Danielle D Visschedyk; Ravikiran Ravulapalli; Giovanni Suarez; Zachari J Turgeon; Anthony A Petrie; Ashok K Chopra; A Rod Merrill
Journal:  J Biol Chem       Date:  2012-09-11       Impact factor: 5.157

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