Literature DB >> 18576312

A broad analysis of IL1 polymorphism and rheumatoid arthritis.

Alyssa K Johnsen1, Robert M Plenge, Vincent Butty, Christopher Campbell, Rebeca Dieguez-Gonzalez, Juan J Gomez-Reino, Nancy Shadick, Michael Weinblatt, Antonio Gonzalez, Peter K Gregersen, Christophe Benoist, Diane Mathis.   

Abstract

OBJECTIVE: It has been suggested that polymorphisms in IL1 are correlated with severe and/or erosive rheumatoid arthritis (RA), but the implicated alleles have differed among studies. The aim of this study was to perform a broad and well-powered search for association between allelic polymorphism in IL1A and IL1B and the susceptibility to or severity of RA.
METHODS: Key coding and regulatory regions in IL1A and IL1B were sequenced in 24 patients with RA, revealing 4 novel single-nucleotide polymorphisms (SNPs) in IL1B. These and a comprehensive set of 24 SNPs tagging most of the underlying genetic diversity were genotyped in 3 independent RA case-control sample sets and 1 longitudinal RA cohort, totaling 3,561 patients and 3,062 control subjects.
RESULTS: No fully significant associations were observed. Analysis of the discovery case-control sample sets indicated a potential association of IL1B promoter region SNPs with susceptibility to RA (for RA3/A, odds ratio [OR] 1.27, P = 0.0021) or with the incidence of radiographic erosions (for RA4/C, OR 1.56, P = 0.036), but these findings were not replicated in independent case-control samples. No association with rheumatoid factor, anti-cyclic citrullinated peptide, or the Disease Activity Score in 28 joints was found. None of the associations previously observed in other studies were replicated here.
CONCLUSION: In spite of a broad and highly powered study, we observed no robust, reproducible association between IL1A/B variants and the susceptibility to or severity of RA in white individuals of European descent. Our results provide evidence that, in the majority of cases, polymorphism in IL1A and IL1B is not a major contributor to genetic susceptibility to RA.

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Year:  2008        PMID: 18576312      PMCID: PMC2533126          DOI: 10.1002/art.23592

Source DB:  PubMed          Journal:  Arthritis Rheum        ISSN: 0004-3591


  49 in total

1.  European genetic study on rheumatoid arthritis: is there a linkage of the interleukin-1 (IL-1), IL-10 or IL-4 genes to RA?

Authors:  P Barrera; S Fauré; J F Prud'homme; A Balsa; P Migliorini; D Chimenti; T R Radstake; L B van de Putte; D Pascual-Salcedo; R Westhovens; K Maenaut; H Alves; A Lopes-Vaz; C Stravopoulos; M Spyropoulou; P Fritz; T Bardin; D Charron; V Lepage; M Martinez; F Cornélis
Journal:  Clin Exp Rheumatol       Date:  2001 Nov-Dec       Impact factor: 4.473

2.  High-resolution haplotype structure in the human genome.

Authors:  M J Daly; J D Rioux; S F Schaffner; T J Hudson; E S Lander
Journal:  Nat Genet       Date:  2001-10       Impact factor: 38.330

3.  The structure of haplotype blocks in the human genome.

Authors:  Stacey B Gabriel; Stephen F Schaffner; Huy Nguyen; Jamie M Moore; Jessica Roy; Brendan Blumenstiel; John Higgins; Matthew DeFelice; Amy Lochner; Maura Faggart; Shau Neen Liu-Cordero; Charles Rotimi; Adebowale Adeyemo; Richard Cooper; Ryk Ward; Eric S Lander; Mark J Daly; David Altshuler
Journal:  Science       Date:  2002-05-23       Impact factor: 47.728

4.  Genetic Power Calculator: design of linkage and association genetic mapping studies of complex traits.

Authors:  S Purcell; S S Cherny; P C Sham
Journal:  Bioinformatics       Date:  2003-01       Impact factor: 6.937

5.  Two independent alleles at 6q23 associated with risk of rheumatoid arthritis.

Authors:  Robert M Plenge; Chris Cotsapas; Leela Davies; Alkes L Price; Paul I W de Bakker; Julian Maller; Itsik Pe'er; Noel P Burtt; Brendan Blumenstiel; Matt DeFelice; Melissa Parkin; Rachel Barry; Wendy Winslow; Claire Healy; Robert R Graham; Benjamin M Neale; Elena Izmailova; Ronenn Roubenoff; Alexander N Parker; Roberta Glass; Elizabeth W Karlson; Nancy Maher; David A Hafler; David M Lee; Michael F Seldin; Elaine F Remmers; Annette T Lee; Leonid Padyukov; Lars Alfredsson; Jonathan Coblyn; Michael E Weinblatt; Stacey B Gabriel; Shaun Purcell; Lars Klareskog; Peter K Gregersen; Nancy A Shadick; Mark J Daly; David Altshuler
Journal:  Nat Genet       Date:  2007-11-04       Impact factor: 38.330

6.  Screening the genome for rheumatoid arthritis susceptibility genes: a replication study and combined analysis of 512 multicase families.

Authors:  Damini Jawaheer; Michael F Seldin; Christopher I Amos; Wei V Chen; Russell Shigeta; Carol Etzel; Aarti Damle; Xiangli Xiao; Dong Chen; Raymond F Lum; Joanita Monteiro; Marlene Kern; Lindsey A Criswell; Salvatore Albani; J Lee Nelson; Daniel O Clegg; Richard Pope; Harry W Schroeder; S Louis Bridges; David S Pisetsky; Ryk Ward; Daniel L Kastner; Ronald L Wilder; Theodore Pincus; Leigh F Callahan; Donald Flemming; Mark H Wener; Peter K Gregersen
Journal:  Arthritis Rheum       Date:  2003-04

7.  Susceptibility for and clinical manifestations of rheumatoid arthritis are associated with polymorphisms of the TNF-alpha, IL-1beta, and IL-1Ra genes.

Authors:  Jasmina Trifunovic Cvetkovic; Solveig Wallberg-Jonsson; Birgitta Stegmayr; Solbritt Rantapaa-Dahlqvist; Ann Kari Lefvert
Journal:  J Rheumatol       Date:  2002-02       Impact factor: 4.666

8.  HLA-DRB1 genotype associations in 793 white patients from a rheumatoid arthritis inception cohort: frequency, severity, and treatment bias.

Authors:  James F Fries; Frederick Wolfe; Raymond Apple; Henry Erlich; Teodorica Bugawan; Tyson Holmes; Bonnie Bruce
Journal:  Arthritis Rheum       Date:  2002-09

9.  Association of interleukin-4 and interleukin-1B gene variants with Larsen score progression in rheumatoid arthritis.

Authors:  Stéphane Genevay; Francesco S Di Giovine; Thomas V Perneger; Tania Silvestri; Sibylle Stingelin; Gordon Duff; Pierre-André Guerne
Journal:  Arthritis Rheum       Date:  2002-06-15

10.  Regulatory polymorphisms in extracellular matrix protease genes and susceptibility to rheumatoid arthritis: a case-control study.

Authors:  Julio Rodriguez-Lopez; Eva Perez-Pampin; Juan J Gomez-Reino; Antonio Gonzalez
Journal:  Arthritis Res Ther       Date:  2006       Impact factor: 5.156

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  8 in total

1.  [Familial clustering, genetic roots and insights into the pathogenesis of autoimmune diseases].

Authors:  M Pierer; C Baerwald; U Wagner
Journal:  Z Rheumatol       Date:  2009-11       Impact factor: 1.372

2.  Pro-inflammatory cytokine response pre-dominates immuno-genetic pathway in development of rheumatoid arthritis.

Authors:  E K Krishna Priya; Lekshmy Srinivas; S Rajesh; Kesavarao Sasikala; Moinak Banerjee
Journal:  Mol Biol Rep       Date:  2020-10-19       Impact factor: 2.316

3.  Variants in the interleukin-1 alpha and beta genes, and the risk for periodontal disease in dogs.

Authors:  C Albuquerque; F Morinha; J Magalhães; J Requicha; I Dias; H Guedes-Pinto; E Bastos; C Viegas
Journal:  J Genet       Date:  2015-12       Impact factor: 1.166

4.  Secondary failure to treatment with recombinant human IL-1 receptor antagonist in Chinese patients with rheumatoid arthritis.

Authors:  Jun Bao; Tao Yue; Wei Liu; Qing Zhang; Ling Zhou; Hu-Ji Xu; Sheng-Ming Dai
Journal:  Clin Rheumatol       Date:  2011-01-11       Impact factor: 2.980

5.  Single Nucleotide Variants of Candidate Genes in Aggrecan Metabolic Pathway Are Associated with Lumbar Disc Degeneration and Modic Changes.

Authors:  Romain Shanil Perera; Poruwalage Harsha Dissanayake; Upul Senarath; Lalith Sirimevan Wijayaratne; Aranjan Lional Karunanayake; Vajira Harshadeva Weerabaddana Dissanayake
Journal:  PLoS One       Date:  2017-01-12       Impact factor: 3.240

6.  Meta-analyses of IL1A polymorphisms and the risk of several autoimmune diseases published in databases.

Authors:  Hang Su; Na Rei; Lei Zhang; Jiaxiang Cheng
Journal:  PLoS One       Date:  2018-06-07       Impact factor: 3.240

Review 7.  Interleukin-1 in the Response of Follicular Helper and Follicular Regulatory T Cells.

Authors:  Paul-Gydéon Ritvo; David Klatzmann
Journal:  Front Immunol       Date:  2019-02-27       Impact factor: 7.561

8.  Association of neuropeptide Y (NPY), interleukin-1B (IL1B) genetic variants and correlation of IL1B transcript levels with vitiligo susceptibility.

Authors:  Naresh C Laddha; Mitesh Dwivedi; Mohmmad Shoab Mansuri; Mala Singh; Hetanshi H Patel; Nishtha Agarwal; Anish M Shah; Rasheedunnisa Begum
Journal:  PLoS One       Date:  2014-09-15       Impact factor: 3.240

  8 in total

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